Gene Daci_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3123 
Symbol 
ID5748707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3440711 
End bp3441568 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content71% 
IMG OID641298226 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001564146 
Protein GI160898564 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCAGG CGGACTGCAT CGTGGGCATT TCCTCCCAAG CGCCAGGCGA CTGGCGCGCC 
CGCGCGCTGC TGCTGGCCTG CAGCGCGCCG GCCGTGGCCT TCTTCGCCGC GTTCTGGCTG
CTGCCGGCCG GCCTGCTGCT GGCGCTGCCG GCGCGTGAAG GCTGGCGCAC CTACTTCGCC
ACGCTGACCG ACGCGCTGTA CCTGCAAAGC CTGCTGCAGA CGCTGGCCCT GTCGCTGGCC
GTGACCCTGG CCACGCTGCT GATCGGCGCG GTGATGGGCA TTGCGCTGGC GCGCCACCGC
TTCACGGGGC GCGGCCTGCT GCTGTCGCTG CTGACGCTGC CGCTGTCGTT TCCGGGCGTG
ATCATCGGCT TTTTCATCAT CCTGCTGGGC GGGCGCCAGG GCGCGCTGGC CGATCTGTCG
GTGGCCCTGG GCGGCGAGCG GATCACCTTC GCCTACGGGC TGCTGGGCCT GTTCCTGGGC
TACCTGTACT TCTCGCTGCC GCGCGCCATC GCCTCCTACA CGGCAGCGGC CGAGGCGCTG
GACCCGCACC TGGAAGAGGC CGCGCGCTCG CTGGGCGGCA ATGGCTGGCG CGTGGCGCGC
GATGTGTGGT GGCCGCAGCT GCTGCCCACC ACGCTGGCCT GCGGCGCCAT CGTGTTCGCC
ACGTCGGTCG GCGCCTTCGG CACGGCCTTC ACGCTGTCGA GCAAGTTCGA GGTGCTGCCC
ATCACCATCT ACAACGAGTT CACCAACTAC GCCAACTTCG CCCTGGCCGC CAGCCTGTCC
ATCAGCCTGG GGCTGATCAC CTGGCTGGTG CTGTGGCTGT CGCGGCGCTG GGCGGGTCCG
GCCGCCTCGG GAGTCTGA
 
Protein sequence
MSQADCIVGI SSQAPGDWRA RALLLACSAP AVAFFAAFWL LPAGLLLALP AREGWRTYFA 
TLTDALYLQS LLQTLALSLA VTLATLLIGA VMGIALARHR FTGRGLLLSL LTLPLSFPGV
IIGFFIILLG GRQGALADLS VALGGERITF AYGLLGLFLG YLYFSLPRAI ASYTAAAEAL
DPHLEEAARS LGGNGWRVAR DVWWPQLLPT TLACGAIVFA TSVGAFGTAF TLSSKFEVLP
ITIYNEFTNY ANFALAASLS ISLGLITWLV LWLSRRWAGP AASGV