Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3113 |
Symbol | |
ID | 5748697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3430225 |
End bp | 3430941 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641298216 |
Product | putative cobalt transport system, periplasmic-binding protein |
Protein accession | YP_001564136 |
Protein GI | 160898554 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.102558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCCA ACCCCTGTTT CGCATCCGTT GCAACCGCCG CATTCGTGGT CCTGCTGGCC TGCGCGCCGC TGGCCCAGGC CCACAACGTC TGGCTGGAGC CCGATGCCGA CGGCGCCTAC ACCGTGCAAT TCGGCGGCCA TGAGGGCAAG CTGGAGAACT TTGCGGCCGG CAAGCTCAAG AGCGTTGAGG CCTATGACGC GCGCGGCCGC CGCATCGACG TGGCCGTGCA GCCCGTGCCC GGCGGCGCCC GCGCCACGCC GGCCCGCAAG GCCGCGCTGC TGGCCGCGCA TTTCGACAAC GGATTTTTCA GCCGCGTGGG CGAGGGGCCG ATGGTCGAAA AGCCCATGAC CGAGAACCCT GGCGCCACCA GCGGCGTGCA TGCGCTCAAG TTCCACAAGA CCATCCTCGA ATGGGGCCCG GTCACCCGCG AGAAGCTGGG CCAGACCCTG GAGATCATCG CCAAGACCCG CCGCTCGCCC CACGCGGGCG AGCCCCAGCA ATTCCAGGTG CTGCTGAACG GCCAGCCTTG GGCCGGCGTG CGCGTGTCGC TGGGAGAAAA GGGCGAGCCC CTGGAGACCG ATGCCGACGG CTTGGTGACC GTGCTGCCGC GTGCCGGGCT CAACCAGTTG CTGGCCATCG TGCGGCTGCC TGTCTCCGGC GATGCGCGCA CCACCAGCCT CAGCTACGAG TACCTGCTGG GGTTTTCGGC GCATTGA
|
Protein sequence | MKSNPCFASV ATAAFVVLLA CAPLAQAHNV WLEPDADGAY TVQFGGHEGK LENFAAGKLK SVEAYDARGR RIDVAVQPVP GGARATPARK AALLAAHFDN GFFSRVGEGP MVEKPMTENP GATSGVHALK FHKTILEWGP VTREKLGQTL EIIAKTRRSP HAGEPQQFQV LLNGQPWAGV RVSLGEKGEP LETDADGLVT VLPRAGLNQL LAIVRLPVSG DARTTSLSYE YLLGFSAH
|
| |