Gene Daci_3113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3113 
Symbol 
ID5748697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3430225 
End bp3430941 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID641298216 
Productputative cobalt transport system, periplasmic-binding protein 
Protein accessionYP_001564136 
Protein GI160898554 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5266] ABC-type Co2+ transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.102558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA ACCCCTGTTT CGCATCCGTT GCAACCGCCG CATTCGTGGT CCTGCTGGCC 
TGCGCGCCGC TGGCCCAGGC CCACAACGTC TGGCTGGAGC CCGATGCCGA CGGCGCCTAC
ACCGTGCAAT TCGGCGGCCA TGAGGGCAAG CTGGAGAACT TTGCGGCCGG CAAGCTCAAG
AGCGTTGAGG CCTATGACGC GCGCGGCCGC CGCATCGACG TGGCCGTGCA GCCCGTGCCC
GGCGGCGCCC GCGCCACGCC GGCCCGCAAG GCCGCGCTGC TGGCCGCGCA TTTCGACAAC
GGATTTTTCA GCCGCGTGGG CGAGGGGCCG ATGGTCGAAA AGCCCATGAC CGAGAACCCT
GGCGCCACCA GCGGCGTGCA TGCGCTCAAG TTCCACAAGA CCATCCTCGA ATGGGGCCCG
GTCACCCGCG AGAAGCTGGG CCAGACCCTG GAGATCATCG CCAAGACCCG CCGCTCGCCC
CACGCGGGCG AGCCCCAGCA ATTCCAGGTG CTGCTGAACG GCCAGCCTTG GGCCGGCGTG
CGCGTGTCGC TGGGAGAAAA GGGCGAGCCC CTGGAGACCG ATGCCGACGG CTTGGTGACC
GTGCTGCCGC GTGCCGGGCT CAACCAGTTG CTGGCCATCG TGCGGCTGCC TGTCTCCGGC
GATGCGCGCA CCACCAGCCT CAGCTACGAG TACCTGCTGG GGTTTTCGGC GCATTGA
 
Protein sequence
MKSNPCFASV ATAAFVVLLA CAPLAQAHNV WLEPDADGAY TVQFGGHEGK LENFAAGKLK 
SVEAYDARGR RIDVAVQPVP GGARATPARK AALLAAHFDN GFFSRVGEGP MVEKPMTENP
GATSGVHALK FHKTILEWGP VTREKLGQTL EIIAKTRRSP HAGEPQQFQV LLNGQPWAGV
RVSLGEKGEP LETDADGLVT VLPRAGLNQL LAIVRLPVSG DARTTSLSYE YLLGFSAH