| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3112 |
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| Symbol | |
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| ID | 5748696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3428150 |
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| End bp | 3430213 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298215 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001564135 |
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| Protein GI | 160898553 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.589119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATC CTCTGAAATT TCCTTCTCGG CCCTGCGCCT TGCACCAGAT TGCGGCGGCC
GGCCTGCTGG GCCTGGCCGC CATTCCCCAG GCTGGTGCAC AGCAGGCGAC GGATGCCTCG
CCCAGCCTGC AGCCCGTCGA GGTCAAGGGC CAGACCGCGC GTGGCGCCTC GGCCGCCTAC
ACCACCACGG TGATCGAGGC CGAGGACATT GCCAACGCCC ATGTCAGTCA TCCGCAGGAG
CTGCTGCGCC AGGTGCCCGG CATGAATGTG CAGAACTACC AGCTGTCCGG CGTGGGTGAC
GCCATCGTCA TGCGCGGCTT CGGCGGTGGG GGCCATGGCG GCGACGTGGG CGTGGTGCTG
GACGGCATTC CACTGAACGA AGCCATGTCG CATGCCGACG GCTATGTGGA CCTGGGCGTG
ATCGTGCCGC TGGAGATGGA GCGCATCAGC ATCTACAAGG GTCCCGTGTC CGCGCTGTAC
GGCAACTTCA ACCGTGCAGG GCTGATGGCG ATAGAGACGC GCAAGCAGGG CGACTACACC
CCCTACCGCG AGGCCGACGT GAGCCTGGCC TCGCACGGCA CGCTGGACGC TCAGGCGGCG
CTGGGGCTGA AGCCGGGCGA TGGCGAGTTC CTGAACCTGG CGGCCCAGCA CTACCGCACG
GACGGTTTCC GCGCGCAGTC GCAAATGCAG CGCAGCACGG CATCCCTGCG TTGGAGCAAG
CGGCTCTCGT CGCAGTTGGA GGTGGCGTTG TCGGCACGGC TGCACCATGG TGAGGGCGAT
TCGCCTTCGT ACCTGACGGC GGGGCAGTTC GCACGCGATC CGCATGGCAT CGATCCGCGC
GCCATGAACG ATGGCACGCG CAAGAACTTC GCCACGCTGC GCGCCGATGT GCAGTACGCG
CTCTCGCCAC GGCTGACCTG GCTGGGCTAT GCCTACACCA CGCAGCAGAG CTTCACGCGC
TGGTTCAGCC GGCCCATCGA CGCACTGCAG TGGCGCCAGC GCGAGGAAAG CTATGACCGC
GCCGTCTACG GCGCCGGCAC CAGCCTCAAT GGCCGCCATG TCACGGCGCT GACCCCGCTC
AACTGGGTGG CCGGGCTGGA GGCCGTGCGC GAATCCACCG ACTACCAGTT CTACGACGGC
CTGCAATGGC GCGAGCGCAC GGGCGCGGCC ATTGATGACC GCAATTCCAG GCTCAACACC
CTCTCGGCCT TTGCCGAGGT GGATGCGCCC ATCCACCGCC TGCTGCAGCT GTCTGCCGGC
CTGCGCTGGG ACCGCTTCAC GGGCGGCTGC CGGCCCAATG GCCCCGAGAC GGGCAGCGAC
CCCTGCGGCC CGCTGGCTCG CACCTCGCAT GCCAGCCCCA AGCTGGGCCT GCGCTCGCAG
GTGGCGCCGG GCGTGCTGCT GCGCGCCAGC TGGTCCGAAG GATTTGCGCT GGCCAGCGAT
TTCGCCAAGT ACGCGCTGGG CGCCGCGCGG CTCGATCCCA ACATCTTCCG GCAGACCGAA
GTGGGCGCGC AGATCAAGCC CATGCCGGGC CTGGTGCTGG ATGTGGCCGC CTATCGCCTG
CAGTCCTCGG GCGAGATCCG CAACGTGGCG CCCGGCGTAT ACGAGAACTT CGGCGCCACG
CGCCGCACGG GCGTGGAGAC CAGCGCGCTG TGGGCGGTGC GCAAGAACCT GGACCTGCAA
CTGGCCTGGG GCAGCGCCCA TTCGCGCGTG ACCGAGAACG GCAACCCGGC CCTGGTCGGC
AACCAGGTGG CCGGCGTGCC CCGGCAGACT GCCACCGTGG GCCTGGCCTG GCGCCCGCTG
GCGCAGTGGG AGGGCACGCT CACCTGGCGC CGCGTGGGCC GCTATGCCGT CACGGCCGAC
AACAGCGTGT TCTACGGCGG CTACGCCACC TGGGACCTGG GCCTGAGCTG GCGCCTGCCT
TCGGCGCGCA GCCGCATCTA TGCCGTGGTC TCCAACCTGG GGGACAAGGC CTATGCCACG
TCGGCCTCGG TCATCCGCGG CGTGCCGCTG TTCGCGCCCG GCGCGCCGCG CACGCTCAAG
GTCGGCGTGC AGACACAGTT TTGA
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| Protein sequence | MTHPLKFPSR PCALHQIAAA GLLGLAAIPQ AGAQQATDAS PSLQPVEVKG QTARGASAAY
TTTVIEAEDI ANAHVSHPQE LLRQVPGMNV QNYQLSGVGD AIVMRGFGGG GHGGDVGVVL
DGIPLNEAMS HADGYVDLGV IVPLEMERIS IYKGPVSALY GNFNRAGLMA IETRKQGDYT
PYREADVSLA SHGTLDAQAA LGLKPGDGEF LNLAAQHYRT DGFRAQSQMQ RSTASLRWSK
RLSSQLEVAL SARLHHGEGD SPSYLTAGQF ARDPHGIDPR AMNDGTRKNF ATLRADVQYA
LSPRLTWLGY AYTTQQSFTR WFSRPIDALQ WRQREESYDR AVYGAGTSLN GRHVTALTPL
NWVAGLEAVR ESTDYQFYDG LQWRERTGAA IDDRNSRLNT LSAFAEVDAP IHRLLQLSAG
LRWDRFTGGC RPNGPETGSD PCGPLARTSH ASPKLGLRSQ VAPGVLLRAS WSEGFALASD
FAKYALGAAR LDPNIFRQTE VGAQIKPMPG LVLDVAAYRL QSSGEIRNVA PGVYENFGAT
RRTGVETSAL WAVRKNLDLQ LAWGSAHSRV TENGNPALVG NQVAGVPRQT ATVGLAWRPL
AQWEGTLTWR RVGRYAVTAD NSVFYGGYAT WDLGLSWRLP SARSRIYAVV SNLGDKAYAT
SASVIRGVPL FAPGAPRTLK VGVQTQF
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