| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3108 |
|---|
| Symbol | |
|---|
| ID | 5748692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3425688 |
|---|
| End bp | 3426311 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641298211 |
|---|
| Product | deaminase-reductase domain-containing protein |
|---|
| Protein accession | YP_001564131 |
|---|
| Protein GI | 160898549 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0380037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACCCG ACAGGACACC CGCAAAAGCA CACGGCAATG CGTTCGGCAA TGCGTTCGGC
AAGGTCTTCA TCGCCACTTC GGTGGATGGT TTCATTGCCC GGCCCGATGG TTCGCTGGAC
TGGCTGCCGG CCGGGGGCGA TGGCGGCGAG GACTACGGCT ACGCGGCCTT CATGAGGACG
GTGGATGGCA TCGTCATGGG CCGCTCCACC TATGAAAGCG TGCTCGGCTT CGACGGCTGG
CCGTTTGAGA AACCCGTGGT GGTGATGAGC CGCACGCTGG GCGCGAGCGA TGTGCCTGTG
CACCTGCGCG GCAAGTTGCG CATCACGTCC GCCCAGCCTG CCCAACTGGT GGCCGAGCTG
CGGGCCGAGG GCTGGAGCAG CGCCTATATC GACGGCGGCG CCGTGATACG CGCCTTCCTG
GCGGCGGGTG AGGTGGGCGA GATGACCATC ACCCGCGTGC CCGTGCTGAT TGGCGCGGGG
CGGCCGCTGT TTGGCGATAT CGGCTGCGAT CTGCGGTTGA CCTGCCTGGC CTCCCAGGCC
TATCCCAGCG GCATGGTCAG CACGCGCTAC CGCGTGGAGG CGGGCGGCCG GGTCATGGTG
CGCAACGGGG GCGGCGATGA GTGA
|
|---|
| Protein sequence | MAPDRTPAKA HGNAFGNAFG KVFIATSVDG FIARPDGSLD WLPAGGDGGE DYGYAAFMRT
VDGIVMGRST YESVLGFDGW PFEKPVVVMS RTLGASDVPV HLRGKLRITS AQPAQLVAEL
RAEGWSSAYI DGGAVIRAFL AAGEVGEMTI TRVPVLIGAG RPLFGDIGCD LRLTCLASQA
YPSGMVSTRY RVEAGGRVMV RNGGGDE
|
|---|
| |