Gene Daci_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3100 
Symbol 
ID5748684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3418089 
End bp3418412 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content66% 
IMG OID641298203 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001564123 
Protein GI160898541 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA ACATCTCCGG CTGCTCCGTG GAAGAAGCCA TGCGCCTGCT GGGCGGCCGC 
TGGAGGCTGC TCATCGCCTC CTACCTCATC GACGGCCCCC GCCGCTTCAA CGACCTGCGC
CGCGACATGC CCGGCATCTC CCAACGCTCC CTCACCCTGG ACCTTCGCGC GCTGGAGGAA
GCGGGCCTGG TCAAGCGCAC CGTCTACCCC ACGGCGCCGA TCAAGGTGGA GTACGAGCTG
ACGCCCGATG GGGAGCGGCT CAAGCCCGTG GTGGAAGTGA TGAAGGAGTT TGGATTGTGG
GTGAAGGGGA AGGCGCCGGC CTGA
 
Protein sequence
MKSNISGCSV EEAMRLLGGR WRLLIASYLI DGPRRFNDLR RDMPGISQRS LTLDLRALEE 
AGLVKRTVYP TAPIKVEYEL TPDGERLKPV VEVMKEFGLW VKGKAPA