| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3079 |
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| Symbol | |
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| ID | 5748663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3394574 |
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| End bp | 3395785 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641298182 |
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| Product | response regulator receiver modulated diguanylate phosphodiesterase |
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| Protein accession | YP_001564102 |
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| Protein GI | 160898520 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.713986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.535279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCGA CATTCAAAGC ACTCATTCTT GACGACCACG CCCTGTGCTG CGAGCACACG
CGCAGCCTGC TCATGGAGGC GGGAATCGTG GACACGCACA TTGCCTGCAA CGCACGCGAT
GCCCTGCAAA TGCTGCGCGA TGGCGGATTC CACCTCGTCA TCACCGACCT GAAAATGCCC
GACATGGACG GCCTGCAGTT CATCAATGAA CTGAGCCAGC GCGGCCTGCA TCCCATGCTC
GTCATATCCA GCTCCTGCTC GCGCCGGTTG ATGAACAGTG TCAGTCTCAT GGCCAAGGAG
TCCGGCTTTT CCGTCATCGG GATGTTTCAA AAGCCGTTCG GTGCGGACCA TGTCCAGGTC
CTGGCCAGCC AACTCAGATC CTTGCGTGCC TACGAGAGGA AAGGCGCTCC AGGCATCAAG
GAGCGGCCGA TTTTCGCCAA GGCACACCTG ATCCAGGCGC TGGAGGAGAA AACCATACAG
GCCTGGTTCC AGCCCAAGAA ATCCCTGCTC ACGGGCCACA CCGTCGGTGT GGAAGCGCTG
GCACGCTGGA ACCATCGGCA GTTCGGCTTC ATGATGCCGG GCTCGTTCAT GTCCGCCATC
CGGTTCCATG GCCTGGACCA TGCCTTGCTG GTGCGGATGA TGGAAGACGC CATGTCGGCG
CACCTGGCCT GGCGCAGTTC GGGATATGTG ATTCCCGTAT CCGTCAACCT GCCGATACCG
TTGCTGGACG ACATCGGGCT GCCGGATGAG TTGCACGACA TGGCGGCCCG GTGCGGCATC
GCTGCGGAGA ACATCACGTT CGAGTTGCTG GAGGACCAGG CCGTCGGCAT ACCCGCCAAC
TACTACATGT GCGCGAGCCG CCTGCGGCTC AAAGGCTTCG GCCTGGCCCA GGATGACTAC
GGGCGGGGTT ACAGCTCGAT GTACAGCCTC ATCTCCACGC CCTTCACCGA ATTGAAGATC
GACCGGGCCT TCGTGGCCGG CGCCGCGGGT GACGAGGTGC GCACTGCGGC CCTGACGTCG
TCGGTGCAGC TGGGGCGGCA ACTGGGCCTG ACGGTGACGG CGGAAGGGGT GGAGACCACC
CAGGACCTGG AGTTGCTGCG CAGCATCGGC TGCGATTGCG TGCAGGGATA TCTGCTGTCC
GCCGCGGTGC CCGCCAGCGA ATTTGCCCTT ATGCTGGCAT CCGAACCCCG ACACCAAGGC
AACCCCACCT GA
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| Protein sequence | MLSTFKALIL DDHALCCEHT RSLLMEAGIV DTHIACNARD ALQMLRDGGF HLVITDLKMP
DMDGLQFINE LSQRGLHPML VISSSCSRRL MNSVSLMAKE SGFSVIGMFQ KPFGADHVQV
LASQLRSLRA YERKGAPGIK ERPIFAKAHL IQALEEKTIQ AWFQPKKSLL TGHTVGVEAL
ARWNHRQFGF MMPGSFMSAI RFHGLDHALL VRMMEDAMSA HLAWRSSGYV IPVSVNLPIP
LLDDIGLPDE LHDMAARCGI AAENITFELL EDQAVGIPAN YYMCASRLRL KGFGLAQDDY
GRGYSSMYSL ISTPFTELKI DRAFVAGAAG DEVRTAALTS SVQLGRQLGL TVTAEGVETT
QDLELLRSIG CDCVQGYLLS AAVPASEFAL MLASEPRHQG NPT
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