| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3078 |
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| Symbol | |
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| ID | 5748662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3392245 |
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| End bp | 3394569 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298181 |
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| Product | histidine kinase |
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| Protein accession | YP_001564101 |
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| Protein GI | 160898519 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.398115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTTG CACTGGCGAT CATGGCCATG CTGGCCTGTG CTGGTCACGG CGGCAGGGGC
GACGCCGCCC CGGCGACGCC ATCGCGCAGC CTCGGTCATG TGCCCGTGCG AGACGTTCAG
TTGTTTTTCA TGGACCGATG TTTCCTGCTG CTGGACGCTG CGGTGGGGGC CACGCACGCA
GCCATCCACA CGCAAGCCGG TTATGCCTGG CCGTGGCGCG CCAGCGCACC GCAGGGCCAG
CCCGGGCCGC TCCATTCACT GATGCAGGCA GGCCGGGCGC TTCCCGAATC CCTGTTGCTG
CGCAAATCCG CGAACAACGC CGGATGGCTT GCAGACCGCT GGGAGCCCGC GCGGCAGCTG
GTCAGGGCCC ATGTCTGGCT GCTGCTGTGG TCCGTGGCGC TGGGACTTGC CTTCATGGCT
GTACTTGCAT GGTGCGTGCG CCGGCTGCGC CGCAGGGTGC CGGCTTCGGC CTGGAGCCGG
GCAGGTGCCT GCGCCTGCGC CGCCGGTGAT GCGCTCTGCC GCAAGCTGCT GGACACGGCC
CCCGTGGGCC TGGCGCTGGT GCGGTGCAGC GATCGCAGCC TGCTGCTGTC CAACGGACTG
GCGCGGCAGT GGGTGTGCAG TGATGCTTCC TGGTTTGAGC ATGCCCTGGC CGGGGGCACG
CAGCAGGGCC CGCGTGAGCT GGCGCTGGGA GACGGTCGGT TGGTGGAGGT CAGCACCACG
CCCACGACCC ACGCCGGCGA GCCGGTGGTT TTCTGCCTGG TCAGCGATGT GACGGCGCTC
AGGCAGGTGC AGGCAGCGCT GGTTGATGCC AAGCTGCGCG CCGAATCGGC CAGCCAGGCC
AAGACGCAGT TTCTGGCCAC CATGAGCCAT GAAATACGGA CGCCGCTCTT TGGCATCCTG
GGAACGCTGG AGCTGCTGGC GCTGTCCAGG GTTCCTTCCG AACAGACACG CTACCTGGGG
GCCATGCAGC AGGCATCGGC GTCCTTGCTG CGCATCGTCA ACGACAGCCT GGACCTGTCG
GCCATCGAGG CGGGCCGGTT GCAACTGGAG GCCCATGCGT TCTCGGCCAC CGAACTGCTC
GACAGCGTGG CCGCGGGCCT GCTGTCGCGT GCCGAGCAAA AGGGGCTGCA GCTGTATGCC
GTCTCCGATG TGAAAACGCC GCCCCTGCTG GTGGGCGATG CCTTGCGGCT GCGGCAGATC
CTGGACAACC TGGTGGGCAA TGCCATCAAG TTCACGTTCT CCGGCCATGT GGCCATCCGC
CTGCAGGTCA TGGGAGAGAG CGAGGAAGGC ACCGACCTGC GGTTCCAGGT GCAGGACACA
GGCATCGGCA TCGACCCGGA GCAGCAGCCC TTCCTGTTCG ACCCGTACTT CCGTGCCCAT
GCGGCCACGC AGCAGCAGGT CCAGGGCGCG GGCCTGGGGC TGTCCATCTG CCTGCGCCTC
AGCCAGGAGA TGGGCGGGCG GCTGACGGCC GCCAGCCAGC CGGGACTGGG GACCTGCGTG
TCATTCGAGC TGCGCCTGCC GCGCGAGAGC GCGGCAGGCT ATGAGGCGGT GCCCAGCCTG
TTGCCGCAGA CCGTCTACGT GGATGGCGCC ATTCCGGAAG TCGTGCACAA CCTGTGCGCC
TGGCTGCGGC ATTGGGGCGC CATGGCCCAG CCGTACCGGG AGCAGGTGCA GGGCCCCAAT
GAACAGGCGG TGCTGGTGCA AGCCTGGCCA CGGTCGGTGC GCCGTCCGCA ATGGACGGGC
AAATGCGTTC TGGCGCTGGC GCCGGGCGAG GTCCCCCGCG AAACCCTGCA GGCCCGTGTG
TGGGAAACCA GCATGCCTGG CGTGCTGGCC GTGGGCCAGG CGCTGGGCAT GGCCCAGCTG
GGCATTGCGC CGGGCGCGCG CCCTGACCTG TACGCCGCCG TTCCCCAGGT CCACGAGCCG
ATGGGGCTGA GCGTGCTCAT CGTCGAGGAC AACCCCATCA ACAGAATCAT CCTGCGAGAG
CAACTGCAGG TGCTGGGCTG CGAGGTCCAG CAGGCCAGCA ATGGACAGGA CGCGCTGTCC
ATGCCCGGCC TGCTCGAATT CGACGCCGTT CTCACCGACC TGCACATGCC GCTGCTGGAC
GGCCTGGCCC TGGCGCGTGC GCTCAGAAAG CGTGGCTACG GCCGCCCGAT CATCGGGCTG
ACGGCCAATG CCCAGCCGCA GACGCAGACG CAGCCGCAGA CGCAGGCGCA GGCGCAAGGG
CAGGGCGACG GACTGCCGGC CGGCTTCGAC AGCCTGCTGT GCAAGCCATT CACGTTGGCG
GTGCTGCGCA CCACCCTGAA CCACATCAAG CAATGCAGGA CCTGA
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| Protein sequence | MAFALAIMAM LACAGHGGRG DAAPATPSRS LGHVPVRDVQ LFFMDRCFLL LDAAVGATHA
AIHTQAGYAW PWRASAPQGQ PGPLHSLMQA GRALPESLLL RKSANNAGWL ADRWEPARQL
VRAHVWLLLW SVALGLAFMA VLAWCVRRLR RRVPASAWSR AGACACAAGD ALCRKLLDTA
PVGLALVRCS DRSLLLSNGL ARQWVCSDAS WFEHALAGGT QQGPRELALG DGRLVEVSTT
PTTHAGEPVV FCLVSDVTAL RQVQAALVDA KLRAESASQA KTQFLATMSH EIRTPLFGIL
GTLELLALSR VPSEQTRYLG AMQQASASLL RIVNDSLDLS AIEAGRLQLE AHAFSATELL
DSVAAGLLSR AEQKGLQLYA VSDVKTPPLL VGDALRLRQI LDNLVGNAIK FTFSGHVAIR
LQVMGESEEG TDLRFQVQDT GIGIDPEQQP FLFDPYFRAH AATQQQVQGA GLGLSICLRL
SQEMGGRLTA ASQPGLGTCV SFELRLPRES AAGYEAVPSL LPQTVYVDGA IPEVVHNLCA
WLRHWGAMAQ PYREQVQGPN EQAVLVQAWP RSVRRPQWTG KCVLALAPGE VPRETLQARV
WETSMPGVLA VGQALGMAQL GIAPGARPDL YAAVPQVHEP MGLSVLIVED NPINRIILRE
QLQVLGCEVQ QASNGQDALS MPGLLEFDAV LTDLHMPLLD GLALARALRK RGYGRPIIGL
TANAQPQTQT QPQTQAQAQG QGDGLPAGFD SLLCKPFTLA VLRTTLNHIK QCRT
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