| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3068 |
|---|
| Symbol | |
|---|
| ID | 5748652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3379782 |
|---|
| End bp | 3380531 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641298171 |
|---|
| Product | peptide methionine sulfoxide reductase |
|---|
| Protein accession | YP_001564091 |
|---|
| Protein GI | 160898509 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00569269 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAACG ATTCCAACCT CGCCGCCGCA CCCCGCCGCC GCGGCCTTCT CCAACTGCTG
ACCGGCAGCG CCGTGCTGCT GGGCGGCGCC TTGCTGTGGC AGGGCAGCAA CCTGCAGGCG
GCCGAGCAGG CCGTGCGCAT TCCACCACCC GCGCAGGATG CGACCGCCAC GGGCCAGGGG
CCGCAGAAAG CCATCTTTGC GGGCGGCTGC TTCTGGGGCG TGCAAGGCGT GTTCCAGCAC
GTCAAGGGCG TGCAGCGCGC CGTCTCGGGC TACAGCGGCG GCACGGCGGC CCAGGCCTCG
TACTCGGCGG TGAGCAGCGG CCGCACCGGG CATGCGGAGT CGGTCGAGAT CACCTATGAC
CCGGCCCAGG TCAGCTACGG GCAGCTGCTG CAGATCTACT TTTCCGTGGC CCATGACCCG
ACCCAGCTCA ACCGCCAGGG GCCGGACACG GGCACGCAGT ACCGCTCGGC CATCTTCGCC
ACCGACGCCG CGCAGCTCAA GACCGCCCAG GCCTATGTGG CCCAGCTGGA CGCGGCCAAG
GTCTTCGGCA AGCCCATCGT GACCCGGCTG GAGGACAAGC CCAGCTTCTT CCCGGCCGAG
AACTACCACC AGGACTTCAT GACGGAGAAC CCGCGCCACC CCTACATCGT CATCAACGAC
CTGCCCAAGG TGGAGCAGCT CAAGCAGCTG TTCCCGGGCA GCTACCGCGC CGAGCCGGTG
CTGGTCAAGC AGGCCGCCCG GCAGATGTAG
|
|---|
| Protein sequence | MTNDSNLAAA PRRRGLLQLL TGSAVLLGGA LLWQGSNLQA AEQAVRIPPP AQDATATGQG
PQKAIFAGGC FWGVQGVFQH VKGVQRAVSG YSGGTAAQAS YSAVSSGRTG HAESVEITYD
PAQVSYGQLL QIYFSVAHDP TQLNRQGPDT GTQYRSAIFA TDAAQLKTAQ AYVAQLDAAK
VFGKPIVTRL EDKPSFFPAE NYHQDFMTEN PRHPYIVIND LPKVEQLKQL FPGSYRAEPV
LVKQAARQM
|
|---|
| |