Gene Daci_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3021 
Symbol 
ID5748605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3323524 
End bp3324630 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content70% 
IMG OID641298124 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001564044 
Protein GI160898462 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.347142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CCTCCACGCC CCTGTTTCGT CCGCTGCAGC TCGGCCCGCT CAGCCTGCCC 
AACCGCATGG TGATGGCCCC CATGACGCGC AGCCGCACCA GCCAGCCAGG CGACGTGCCC
AATGCATTGA TGGCCACCTA CTACGCACAA CGCGCCAGCG CCGGCCTGAT CGTCTCGGAA
GCCACCCAGA TCTCCCGCCA GGGCCAAGGC TACAGCTTCA CCCCCGGCAT CTATTCAGAG
GCGCAGGTGG ACGGTTGGCG CCGCGTCACG GAGGCGGTGC ATGCCGCCGG CGGGCGCATG
GTGCTGCAGC TGTGGCACGT TGGCCGCATG TCGCATGCCA GCTTTCACGC CGATGGCCTG
CCGGTCGCGC CTTCGGCGCT GTCGCCCCAA GCGCAGGTCT GGGTGGTCGG CGACGACGGT
GTCGGCCGCA TGGTCGACTG CCCCGTGCCG CGCGCACTGA GCGCACAGGA CATCCAGGAC
GTGATCGGCG ACTTCCGCAG GGGCGCGGCC AATGCGATGC GCGCCGGTTT CGATGGCGTG
GAAATCCACG GCGGCAACGG CTACCTGATC GATCAGTTCC TGCGCACCAC CTCCAACCAC
CGCACCGACG CCTACGGCGG CGGCATCGCC CAGCGCACGC GCTTCGCCGA AGAGGTCGCG
GCCGCCGTGG CGGGCGAGGT CGGGGCCGAG CGCACCGGCA TCCGCCTGGC GCCCTTCATC
ACGCAGCGCA ACATGAACTG CCCGCAGATC ATCGAGACCA TCCTGCATCT GGCCAGCAGG
CTCGACGAGA TCGGCCTGGC CTACATCCAC CTGTCGGAAG CCGATTGGGA CGATGCGCCC
GAGATTCCGC AGGACTTCCG CCACGCGCTG CGCCGCGCCT ACCAGGGCAA GGTGATCGTT
GCGGGCAAGT ACGACGCGGA GCGCGCCCAA GCCATCCTGC ACGAGGGCCT GGCAGACCTC
GTCGCCTTCG GCCGCCCCTT CATCGCCAAC CCGGACCTGC CGGCGCGCTA CGCCGCCCAG
GCGCCGCTGG CCGCATTCGA TCCGAAGGCC CTGTTTGGCG GCGACGCGCG CGGCTACTCG
GACTACGCAG CCCTTGCCAC TGCCTGA
 
Protein sequence
MTTASTPLFR PLQLGPLSLP NRMVMAPMTR SRTSQPGDVP NALMATYYAQ RASAGLIVSE 
ATQISRQGQG YSFTPGIYSE AQVDGWRRVT EAVHAAGGRM VLQLWHVGRM SHASFHADGL
PVAPSALSPQ AQVWVVGDDG VGRMVDCPVP RALSAQDIQD VIGDFRRGAA NAMRAGFDGV
EIHGGNGYLI DQFLRTTSNH RTDAYGGGIA QRTRFAEEVA AAVAGEVGAE RTGIRLAPFI
TQRNMNCPQI IETILHLASR LDEIGLAYIH LSEADWDDAP EIPQDFRHAL RRAYQGKVIV
AGKYDAERAQ AILHEGLADL VAFGRPFIAN PDLPARYAAQ APLAAFDPKA LFGGDARGYS
DYAALATA