Gene Daci_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3012 
Symbol 
ID5748596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3315320 
End bp3315754 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content72% 
IMG OID641298115 
Producthypothetical protein 
Protein accessionYP_001564035 
Protein GI160898453 
COG category[R] General function prediction only 
COG ID[COG4113] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.886275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCT TCGTGCTCGA TGCCTCCGTC ACCGCCGCCT GGCTGCTGCC CGATGCCGCC 
AGCGTGCACA CCCAGCGCCT GTATACCCGC ATCCGCCGCC ACGAAGTGGA CCCGCAGGCG
CCCAACCTCT GGCAGTGGGA GTGTGGCAAC CTGATCGCCT CGGGCGTGCA CGGCGGCCGC
ATTCCGCACA GCTCGGTCGA AGGCCTGTGG GGCGTGCTCG AGGCCATCCG CCACCGCGTG
GAGCTGCACG AGCTGGCGCC CGCCCAGCAC AAGGCCGTGC TCGACGTGGC GCTGGACACC
CGCCTGCCGG TCTATGACGC GGCCTACCTG TGGCTGGCGC AGTCGCTGCG CCTGCCGCTG
GCCACCTTTG ACGCGGCCCA GGCCGCCGCC GCCCGCAAGC GCGGCCTGGC GCTGCTGGCC
CCTGAAGATT TCTGA
 
Protein sequence
MTSFVLDASV TAAWLLPDAA SVHTQRLYTR IRRHEVDPQA PNLWQWECGN LIASGVHGGR 
IPHSSVEGLW GVLEAIRHRV ELHELAPAQH KAVLDVALDT RLPVYDAAYL WLAQSLRLPL
ATFDAAQAAA ARKRGLALLA PEDF