Gene Daci_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2996 
Symbol 
ID5748580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3302100 
End bp3302597 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content67% 
IMG OID641298099 
Producthypothetical protein 
Protein accessionYP_001564019 
Protein GI160898437 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0903588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTGA ACACCCCGCA GCCCCGCCCT GGCGCCGCCT GGAACGCCGT GCCCCGCATG 
GGCCAGGGCT TTTTCTGGCA GGACCTGCAG GTTGGCCAGC AGCTGCGCAC CTTCCGCCGC
ACCGTGACCG AATCGGACCT GGTCGCCTTC ATCAATGCCA CGGGCATGCT GGAGGCCATC
TTCATCGAGG AGGGCTACGA CGGCGGCGCC ATTGCCGGCC GCCCCGTGCC GGGCGCCATG
ACCTATGCGC TGATCGAAGG CTTCATCCTG CAAAGCATGA TCCAGGGCAC GGGCCTGGCC
ATGCTGGAGC TGCACCAGAA GATCCTCGGC CCCGTGCTGG TGGGCGACAC CATCGAGGCG
CTGGTCGAGG TCACCGCCAT CAAGCCCACC TCCAAGGGCA ACCGCGCCGT CGTCACCTCG
CGCATCGAGG TCTTCAACCA GGGCCACCAG AAGGTCATGG AATACACGGC CGTGCGCCTG
CTGGCCGGGC GCAGCTAG
 
Protein sequence
MTVNTPQPRP GAAWNAVPRM GQGFFWQDLQ VGQQLRTFRR TVTESDLVAF INATGMLEAI 
FIEEGYDGGA IAGRPVPGAM TYALIEGFIL QSMIQGTGLA MLELHQKILG PVLVGDTIEA
LVEVTAIKPT SKGNRAVVTS RIEVFNQGHQ KVMEYTAVRL LAGRS