Gene Daci_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2968 
Symbol 
ID5748552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3270698 
End bp3271429 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content71% 
IMG OID641298071 
ProductIclR family transcriptional regulator 
Protein accessionYP_001563991 
Protein GI160898409 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.980752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCA AATCAGTGAC GGAATCGGTG GCCGACGAGA ACGCCGCGCC GGGCGGCGTG 
GCGGCCGTGG ACAGGGCCTT GAGCCTGCTG GCAGCGTTTC GCGACGGCGA CGACGGGCTG
ACGCTGGCCC AGTTGTCGGA GCGCACGCGC CTGTACAAGA GCACCGTGCT GCGGCTGCTG
GCCTCGCTGG AGCATGGCGG CTGGGTGCTG CGCATGGATG ACGGCCGCTA CGCCGTGGGC
CCGGCCGTGG CGCGGCTGAA CACCGTCTAT GCCCGGCATT TCTCGCTGGA CAGCGTGGTC
ATGCCCGTGC TGCGCACCCT GGTGCAGGCC ACGGGCGAAA GTGCGGCCTA CCACGTGCGC
CAGGGCCAGG ACCGGCTGTG CCTGTACCGC GTGGATTCAC CGCACCCCGT GCGCGACCAC
GCACGCACGG GCGATCTGCT GCCGCTGGGC CAGGGCGCAG GCGGGCGCGT GCTGTCGGCT
TTCGATGCCG AGCTGTACGC CGCATCGCGC GGCGGCAGCC GCACGCAGCT GGCCCGTGTG
CGCGCCGATG GCTACTGCGC CATGGTGGGA GACAGGCACC GCGAGATCGC AGGGATTTCT
GCCCCCGTGT TCAAGCGCGA TGGGGAATTG GCAGCGGCGC TGACACTGAC CATGCCAGCC
CACCGCTATG AAGAGCGCCA CGCCCGCCAT GTGCTGGCGG CGGCGCGGGA ACTGGGGCTT
TTGCTGCCCT GA
 
Protein sequence
MPRKSVTESV ADENAAPGGV AAVDRALSLL AAFRDGDDGL TLAQLSERTR LYKSTVLRLL 
ASLEHGGWVL RMDDGRYAVG PAVARLNTVY ARHFSLDSVV MPVLRTLVQA TGESAAYHVR
QGQDRLCLYR VDSPHPVRDH ARTGDLLPLG QGAGGRVLSA FDAELYAASR GGSRTQLARV
RADGYCAMVG DRHREIAGIS APVFKRDGEL AAALTLTMPA HRYEERHARH VLAAARELGL
LLP