| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2933 |
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| Symbol | |
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| ID | 5748515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3222375 |
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| End bp | 3223472 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641298034 |
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| Product | porin |
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| Protein accession | YP_001563956 |
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| Protein GI | 160898374 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.435653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCTG CAATCCACCA CGCCCTGCGG GGCCCTGCGG CCCGGGCCAC CGTGCCTTGC
CTGTGCGCTG CGGCGCTGGC CGGCGCAGCC AGTCTGGCCA CGGCGCAAGG CAGCGTCACG
CTGTATGGGC GCATCGTCAG CGGTGTCGAC TATATGAACC GCATTGCCGA AGGGCCGGGC
CGGTCTTCCG ATCAACTCCG GCACGCCGGG CAATGGGGCG CGACCTGGTG GGGGCTGCGC
GGGGCCGAGG ACCTGGGTGG CGGCCTGAGC GCCGTCTTCC ATCTCGAAAG CCAGTTCTCC
GCCGACGACG GCACGGTGGG CGACAGCTTC TTCAACCGCT ATGCGGTGGT CGGCCTGCGC
AGCCAGACAT ACGGCACGCT GCTGCTGGGC CGGGCCATGG GCATTCCCGA TGGCGAGGTC
TGGGCCCTGG ACCCCATGGG CCTGCAGGCC ATGGGCGCGG GCACGCTGCA GGGCAACCGG
ACCTGGGGGT CGCGCCCCAA TGCCATCAGC TACCAGTCGC CGGCCTGGGG AGGGCTCTCG
TTTCGCACCC AGCTGGGGCT GAACGGGGAG GCGGGCCGTT CCCGGGCCGG GCGCCAGGCC
GCCGCCAGCG TGGGCTATGA GCAGGGGCCG CTGGTGCTCA AGGCCTTCTA CGAGGAAATC
CGTGACGGCA ACGGCGCGTT CGCCTCGCTC TACAAGGCAT CGCGCCTGTA CACGGTGGGC
GCAACCTACC GCGTGGGCGG CCTGAAGCTG TTCACGGGCT ACAGCCAGAT CCGGTCAGGT
GCGCTGACGG TGGCCGACGC CGACAACCCG GCAGGCGCCC GCAGTCAGCA GACCTATTGG
ATGGGCGCCA ACTACCAGGC CACGCCGGCC CTGGTGCTGG CGGGCGGCGC CTACCGCGCC
AACCGCAGTG GAGGCGGCGC CAGCCTGGTG AGCCTGGGGG CCAACTACCA TCTTTCCCGG
CGCACCATGC TGTATGGCAC GGTGGGCGCC GTCTCCAACG GCGGCGGAGC CTCGTTCTCG
GTGGAGGCCA ACAGCGCCAG GCCAGCACCC GGGTCCGGTC AGCAGGGCGT CTACACGGGC
ATCGTGCACT CGTTCTGA
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| Protein sequence | MTSAIHHALR GPAARATVPC LCAAALAGAA SLATAQGSVT LYGRIVSGVD YMNRIAEGPG
RSSDQLRHAG QWGATWWGLR GAEDLGGGLS AVFHLESQFS ADDGTVGDSF FNRYAVVGLR
SQTYGTLLLG RAMGIPDGEV WALDPMGLQA MGAGTLQGNR TWGSRPNAIS YQSPAWGGLS
FRTQLGLNGE AGRSRAGRQA AASVGYEQGP LVLKAFYEEI RDGNGAFASL YKASRLYTVG
ATYRVGGLKL FTGYSQIRSG ALTVADADNP AGARSQQTYW MGANYQATPA LVLAGGAYRA
NRSGGGASLV SLGANYHLSR RTMLYGTVGA VSNGGGASFS VEANSARPAP GSGQQGVYTG
IVHSF
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