| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2881 |
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| Symbol | |
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| ID | 5748462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3161417 |
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| End bp | 3162031 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641297981 |
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| Product | Tfp pilus assembly protein FimT-like protein |
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| Protein accession | YP_001563904 |
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| Protein GI | 160898322 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATTGCC ATTGCATTAC GATTGCAAAC ATCAATCAAG AGCAATGGCG CAGGGCTTGC
AGGCCTGTCG CATGGTCCCC CGGCAACGAG AAGCACGCTT GCATGAAAAA CCCCGGTTAC
ACGCGCAACG TCTGTCCAGG CGGCAGGTGG CAACGGCCCC GCGGCTTCAC CCTCATCGAG
ATGATGGTTG TGGTGGCGCT GGTCGCGATT CTGGCCGCTC TGGCCGCTCC TTCCTTCATC
GCCCAAATAG CCAACCAGCG CGTCAGCTCG GCTGCGCTCG AGTTGCAGTC GTTGCTGCAG
CTGGCTCGCT CCGAAGCGGT CTACAAACGG GTGGAAAGCA GCTTCGTGGG CGCGGGGCAG
ACATGGTCCG CCAAGTCGGG AGGGCAACTG GTGCGCGAGG CCCGGGTGCC TGATGCCGTG
ACCGTGTCGC CCTCCGGTGA TTCTTCCCAG GGCGTCCTGT TCGAAACCAC GGGGACCGCC
AGGCAGTTCT CCGGCGCCAG CACGCTGTAC ACGCTGACCG TCACGGCTCG CCATGCCACG
CGCATGCACT GCCTGAGAGT GACTCGCGCC GGGCTTGTGC GCCAGCAGCG GCTGCCTGCC
GGCGGCAGTT GCTGA
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| Protein sequence | MYCHCITIAN INQEQWRRAC RPVAWSPGNE KHACMKNPGY TRNVCPGGRW QRPRGFTLIE
MMVVVALVAI LAALAAPSFI AQIANQRVSS AALELQSLLQ LARSEAVYKR VESSFVGAGQ
TWSAKSGGQL VREARVPDAV TVSPSGDSSQ GVLFETTGTA RQFSGASTLY TLTVTARHAT
RMHCLRVTRA GLVRQQRLPA GGSC
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