Gene Daci_2853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2853 
Symbol 
ID5748429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3128727 
End bp3129596 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content64% 
IMG OID641297948 
Producthypothetical protein 
Protein accessionYP_001563876 
Protein GI160898294 
COG category[S] Function unknown 
COG ID[COG3471] Predicted periplasmic/secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGACG GGGCGAATAG GCCTGAACGG CTCCATACCT GTCACCATCT GGCGGCATGC 
CGTAGCGAAA GGGCGGCATG CAGTTGTATC CCTGAACTAC CTTTCATTTC AAAGGGTGAA
CGCATGAGCA AGCTTTCCAA ACAGCTGTCC CGCCCCTGGG TCAAGTCCGT GGTCGCGGCC
ACTGCGCTGG CCTGTGCCAG CGGTGCCTGG GCGCAGAACG CCGCCTCGGC GCAGGCACAG
CCGGCCAATG TGGTGCAGTT GTCTGCAGAA GGCTCGGTGG ATGTGGTGCA GGACCTGCTG
ACCGCCACCT TGTCGGCCAC GCGCGAAGGG CGCGATGCGG CCACGGTCCA GTCCCAACTG
CAGAAAGTGG TCGAGGCCGC CATGGCAGTG ACCAAGCGCA GCGCCCAGTC GGGCCAGATG
GATGTGAGCA CCGGCAGCTT CGGCATCTAT CCGCGCTATG GCAAGGACAA CAAGGTGGAA
GGCTGGCAGG GCCGCGCCGA GATTCTTCTG CAGGGCCGCG ACTTCGCGCG CATCACGCAG
ACGGCGGCCC AGGTACAGGA CATGACGCTG TCGCAAGTGG GCTTCGGCCT GTCGCGCGAG
GCCCGTGAAA AGGTCGAGGG CGAGGCCCAG GCCAAGGCCA TCGAACAGTT CAAGCAGCGC
GCCTCCACGC TGTCCAAGAG CTTCGGCTTT GCCAACTACA GCCTGCGCGA GGTCAACGTG
AGCAGCAGCG ATACCTCGGT GCCCATGCCG CGTCCGCGCA TGATGGCCAT GTCCGCCAAG
GCTGCCGGCG CGGAAATGGA TGCCGTGTCC GTGGAAGCGG GCAAGGCGCA GGTGATGGTC
CATGTTTCGG GTTCGGTGCA GATGTACTGA
 
Protein sequence
MNDGANRPER LHTCHHLAAC RSERAACSCI PELPFISKGE RMSKLSKQLS RPWVKSVVAA 
TALACASGAW AQNAASAQAQ PANVVQLSAE GSVDVVQDLL TATLSATREG RDAATVQSQL
QKVVEAAMAV TKRSAQSGQM DVSTGSFGIY PRYGKDNKVE GWQGRAEILL QGRDFARITQ
TAAQVQDMTL SQVGFGLSRE AREKVEGEAQ AKAIEQFKQR ASTLSKSFGF ANYSLREVNV
SSSDTSVPMP RPRMMAMSAK AAGAEMDAVS VEAGKAQVMV HVSGSVQMY