Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2801 |
Symbol | |
ID | 5748377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3077581 |
End bp | 3078237 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641297896 |
Product | Asp/Glu racemase |
Protein accession | YP_001563824 |
Protein GI | 160898242 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.493832 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.510062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCGCA TCGCCCTCAT CCACGCCCTC AGCCACTCCG TCGCTCCCAT CAACGAAGCC TTTGCGCGCG ACTGGCCCGA GGCGGTTCGC ATGAACCTGC TGGACGACAG CCTCTCGGCC GACCTGGCGC GCAACGGGCG CGGGCTGGAC GCCGCCATGC ACGAGCGTTT CCAGCGCCTT GCTCAGTACG CCGTGGACAC GGGTGCGCAG GGGATCTTGT TCACCTGCTC GGCCTTTGGC CCCTGCATTG AGGCCGTGGC CGCGCGCCAC GCGCCGCTGC CCGTGCTCAA GCCCAACGAG GCCATGATCG AAGAGGCCGT GCAGGGCCAG CAGGGTGCCT TGGGTTTGAT CTCCAGCTTC GCGCCCACGC TGCAGTCCAT GCCGCCGGAG TTTCCGGCCG GCATCGAACT CGTGCCCGCC CTGGCCGATG GCGCCATGGA CGCGCTCAAC CGGGGCGACA CCGCCACGCA TGACCGCCTG GTGGTCGAGC AGGCCAGGGT CCTGGCCGCG CGTGGCTGCA CGCGCATTGC GCTGGCCCAG TTCAGCATGG CGCGTGCCCG CGCCGCCTGC GAGGCCGCCA CGGGCCTGCC CGTGCTCACC ACGGTGGACA GCGCCGTGCG TGCCCTGCAG CGCCGGCTGG GCGTCCGCCT CGGTTAA
|
Protein sequence | MTRIALIHAL SHSVAPINEA FARDWPEAVR MNLLDDSLSA DLARNGRGLD AAMHERFQRL AQYAVDTGAQ GILFTCSAFG PCIEAVAARH APLPVLKPNE AMIEEAVQGQ QGALGLISSF APTLQSMPPE FPAGIELVPA LADGAMDALN RGDTATHDRL VVEQARVLAA RGCTRIALAQ FSMARARAAC EAATGLPVLT TVDSAVRALQ RRLGVRLG
|
| |