Gene Daci_2801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2801 
Symbol 
ID5748377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3077581 
End bp3078237 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content71% 
IMG OID641297896 
ProductAsp/Glu racemase 
Protein accessionYP_001563824 
Protein GI160898242 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.493832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.510062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA TCGCCCTCAT CCACGCCCTC AGCCACTCCG TCGCTCCCAT CAACGAAGCC 
TTTGCGCGCG ACTGGCCCGA GGCGGTTCGC ATGAACCTGC TGGACGACAG CCTCTCGGCC
GACCTGGCGC GCAACGGGCG CGGGCTGGAC GCCGCCATGC ACGAGCGTTT CCAGCGCCTT
GCTCAGTACG CCGTGGACAC GGGTGCGCAG GGGATCTTGT TCACCTGCTC GGCCTTTGGC
CCCTGCATTG AGGCCGTGGC CGCGCGCCAC GCGCCGCTGC CCGTGCTCAA GCCCAACGAG
GCCATGATCG AAGAGGCCGT GCAGGGCCAG CAGGGTGCCT TGGGTTTGAT CTCCAGCTTC
GCGCCCACGC TGCAGTCCAT GCCGCCGGAG TTTCCGGCCG GCATCGAACT CGTGCCCGCC
CTGGCCGATG GCGCCATGGA CGCGCTCAAC CGGGGCGACA CCGCCACGCA TGACCGCCTG
GTGGTCGAGC AGGCCAGGGT CCTGGCCGCG CGTGGCTGCA CGCGCATTGC GCTGGCCCAG
TTCAGCATGG CGCGTGCCCG CGCCGCCTGC GAGGCCGCCA CGGGCCTGCC CGTGCTCACC
ACGGTGGACA GCGCCGTGCG TGCCCTGCAG CGCCGGCTGG GCGTCCGCCT CGGTTAA
 
Protein sequence
MTRIALIHAL SHSVAPINEA FARDWPEAVR MNLLDDSLSA DLARNGRGLD AAMHERFQRL 
AQYAVDTGAQ GILFTCSAFG PCIEAVAARH APLPVLKPNE AMIEEAVQGQ QGALGLISSF
APTLQSMPPE FPAGIELVPA LADGAMDALN RGDTATHDRL VVEQARVLAA RGCTRIALAQ
FSMARARAAC EAATGLPVLT TVDSAVRALQ RRLGVRLG