Gene Daci_2739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2739 
Symbol 
ID5748315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3007770 
End bp3008885 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content57% 
IMG OID641297834 
Producthypothetical protein 
Protein accessionYP_001563762 
Protein GI160898180 
COG category[R] General function prediction only 
COG ID[COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.61634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAAGCC ACCGGCACTT TGTTGGCATA AAACAAGAGG GATGTATGGC TGACTACTTC 
GAGATCGACT TTCTTGGCGT CGAAACAGCG AAAAGCGGGG ACGCGATCAC GCTGCGCTAC
TCGGTGAATG GCACCGAGGG CGTGCACGTT GTTGACGGTG GGTATCTGGA TACGGGTGAT
CAGATAGTCG AGCATCTGAA GACGTACTAT GGAACAACAG TCATCGACCA TGTGATCCTC
ACGCACCCAG ATCGCGATCA CGCCAACGGA CTACGAAAAG TCCTGGAGCA ATGCACGGTC
AGGAATCTTT GGATCAACCG GCCGTGGATA TACGCGGACC AGTTGATCGA TCGCTTTGAG
ACCTATGAAT CGGTTGAAGC CCTGCGACGG AAGTTGCGCT CAATCTACGA TGCCACGGCA
ATTCTTGAGG ATATTGCGGT GGAGAAGGGA ATTCCAATCC ATGCCCCCCT TCAGGGGCAG
AGCATCGGTC CGTTCGCGGT CATGGCACCT ACCCTGGGGC GCTACTTGGA CCTGATCGTG
GACTCCGCGA AGACACCGGA AGCTGTCGAA GAAAGTGCTT TTGATAGCGC GCTGAGCAGC
ATATTCCGGG CAGTGAAGGC CGCGACCGCC TACATCAAGT CCCTGTGGGG CGAGGAATAT
TTCCCGCCTG AGCCGACCAG TCGTGAGAAT GAAATGAGTG TGGTGCAGTC GGCTGTCTTG
AACGGTCATC GCGTCATGCT TACTGGCGAT GCCGGGCGTG AAGCACTGCA GGAGGTGATC
GACTACGCAC CTTTCGTGGG ACTCGCGCTG CCAGGTATTC GGTATTTCCA AGTGCCCCAT
CACGGCGGGC GACACAACGT TTCGACCGAA GTCTTGGATC AACTGCTCGG CCCACGGTTG
AACAGTATGC CGGACAAGCA CCATTGGAAT GCCATATGCA GTTCTGCCAA GGCGGATGAG
GATCATCCGC GGAAGTCGGT GATTCGCGCC GTATTGCACC GGGGTGGGCA CTGGGCGGCA
ACTGAAAGCC AGAACATACG CATCGGGGCA GGCATCACCC GCGATGGCTG GGTGCCGATT
CCCCAGGCGG CGTATCCGGA AGATCAAGAA AATTGA
 
Protein sequence
MQSHRHFVGI KQEGCMADYF EIDFLGVETA KSGDAITLRY SVNGTEGVHV VDGGYLDTGD 
QIVEHLKTYY GTTVIDHVIL THPDRDHANG LRKVLEQCTV RNLWINRPWI YADQLIDRFE
TYESVEALRR KLRSIYDATA ILEDIAVEKG IPIHAPLQGQ SIGPFAVMAP TLGRYLDLIV
DSAKTPEAVE ESAFDSALSS IFRAVKAATA YIKSLWGEEY FPPEPTSREN EMSVVQSAVL
NGHRVMLTGD AGREALQEVI DYAPFVGLAL PGIRYFQVPH HGGRHNVSTE VLDQLLGPRL
NSMPDKHHWN AICSSAKADE DHPRKSVIRA VLHRGGHWAA TESQNIRIGA GITRDGWVPI
PQAAYPEDQE N