Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2710 |
Symbol | |
ID | 5748286 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2980141 |
End bp | 2981364 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641297805 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001563733 |
Protein GI | 160898151 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCC CGACCTTGAA AGCGGCGGGC ACCGCCAGCC GAACCAAGAC CTTGGCCCTG TCCGCCGTCA GTGTGGCAGT TCTAGCTGCC GTAGGGTACG GCTGGTGGGC TTGGACAACG CAGCAGACAA CCGTGGCCGA TAGAGACGCG AGCGAGGCTG TCGCCCAACC GAACGCTGGC GGCGTTCACC TCAACGCCGC TCAGCTTCAC GCGCAGGGTG TGGAAACCGC ACTCGTCAAG GATGCCGCAG TGATACCGCT GGATGGCTTA CCCGCGCAGA CGGTGGCACC ACTCTCGGCC AGCGCGCAGG TCGTGGCGCC CTATGGCGGT GTGGTGACGC GCGTTCTGGT CGATGAAGGC ACCGCAGTGC GCCAAGGACA GGCGCTGGCG CGCATCCAGA GCAAGGACGT TCTGGCTTCG CAGGCTGATC TGGCGCGTGC CCGCACCGAA GCGGCGGTGG CCGCGGCGCA GGCCCGGCGC GATGCCACGC TATTGGCCGA GGGCATCATC CCAGCCACGC GCAACGAGCA AACCCAGGCG CGCGCGGCGG CTGCGCAAAG TACGTTGCAA GAGGCCAATG GCGCCCTCGC ACGGCTTCGA CCCGTTAGCG GCGGGCAGGC CGGCGAGTAT GAATTGCTGG CGCCTTTGTC CGGGCGAGTG ATGCGTCGTC ACCTGAGCCT CGGGCAGGCG GTTGCGCCGC TCGACATCGC CTTTATAGTG GCTCAGCCTG GTCCGCTGGA TGTCAGCGTC GCGGTTCCGC TGCGCTGGCG CTCGGATCTC CACCCAGGCT TGGAAGTGCG TCTTCCCGAT GGCACGATCG CTCGCGTGAC GGCTGTTGGT GGCGACACTG ACCTCAGTAG TCAGAGCCTG CGGGTACGTG CCCGCGTCGA TGCAGATCAG GCAGGGGCAG ACCGCTATGC GGCCGGGCAG CAGATCAGTG TCGCGCTGTT GCTGCCAGCA CCGCAGGGCA CCTTGAGCGT GCCATCGTCC GCACTGCTGC CAGCGGGCAG CGCCCACGTG CTCTACGTTG CTGAGCCGTC ATCGCAAGAC AAGCAAGGCG ACCTACACGT CCGCGCTGTT CCGGTGCAAC TGCTGGGGCA AGACGAATCA GAGGCGTCAA GCGCCGTGCG TGCCGTCTCG CCAGACACTG CGCCGCTTGC GGCAGGCATG CAGGTCGTCG TGCGCGGTAC GGCACTGCTC AAATCCATCA TTCCATTGCA ATGA
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Protein sequence | MSFPTLKAAG TASRTKTLAL SAVSVAVLAA VGYGWWAWTT QQTTVADRDA SEAVAQPNAG GVHLNAAQLH AQGVETALVK DAAVIPLDGL PAQTVAPLSA SAQVVAPYGG VVTRVLVDEG TAVRQGQALA RIQSKDVLAS QADLARARTE AAVAAAQARR DATLLAEGII PATRNEQTQA RAAAAQSTLQ EANGALARLR PVSGGQAGEY ELLAPLSGRV MRRHLSLGQA VAPLDIAFIV AQPGPLDVSV AVPLRWRSDL HPGLEVRLPD GTIARVTAVG GDTDLSSQSL RVRARVDADQ AGADRYAAGQ QISVALLLPA PQGTLSVPSS ALLPAGSAHV LYVAEPSSQD KQGDLHVRAV PVQLLGQDES EASSAVRAVS PDTAPLAAGM QVVVRGTALL KSIIPLQ
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