| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2685 |
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| Symbol | |
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| ID | 5748261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2955756 |
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| End bp | 2956907 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641297780 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001563708 |
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| Protein GI | 160898126 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.133522 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGT TACCCTTGCA AGGCCGCACC CTGGCGCTGC TTGCCGTCAT CATTCCTTTG
CTGGTGCTTT TTATTTATGT CGGTCTGCGA TCAGGGCCGC TCGCCCCGGT CGCGGTGACG
GTGGCAAGCG TGGAATCACG GGCTATCACA CCGGCGCTGT TCGGCATCGG CACGGTGGAG
GCGCGCTACA CCTACAAGAT CGGGCCGACG TTTGCCGGGC GCGTCAAACG CCTGGAGGTG
CATGTAGGCG ACCAGGTCAA GGCCGGACAG GTGCTCGGCG AGATGGAGCC GGTCGACCTC
GATGATCGGG TGCGCTCACA GGAGTCGGCA TTCAAGCGTG CGGAAGCGGC TTTGCGCGAG
GCAGAAGCCC GGCAAGCCTA CGCGCAAACC CAGGCGCGCC GCTACGAGCA ATTGTTTGCG
GTGCGCTCGA CCAGCGAGGA AATCGTCACC ACCAAGCGGC AGGAACTGCA GATCGCCGAT
GCCGCCTTAT CTGCCGCTCG GGAAGATATT GTCCGGGCAC GCTCCGACCG CGAAGGACTC
GTCGCGCAGC GGAGCAATCT GCGCCTGATC GCGCCGGTCG ACGGTGTAGT CGCCGTGCGC
GATGCCGATC CCGGCACGAC CATCGTCGCG GGCCAGGCCG TGGTGGAAGT GATCGACCCC
AAGAGTTTGT GGATCAATGC GCGCTTCGAC CAGATCAGCG CATCGGGGCT GGCTGGGGGG
TTGCCGACTC TTATCGTCCT GCGTTCGCGT GGTGGCCAGA CCTTGAAAGG TCGCGTGCTG
CGGGTGGAAC CCAAGGCCGA CGCGGTAACC GAGGAAACGC TTGCCAAGGT GACATTCGAT
AACAAACCAG AACCTTTGCC ACCGGTGGGT GAACTGGCCG AAGTCACGGT TGACTTGCCG
GCGCTCCCGG CCGCTCCACT GATCCCCAAC GCTGCCGTCC AGCGTGAGGG CGACAAAGTT
GGTGTCTGGC AAATCGTGGA TGGTGATCTG CATTTCTCCC CGGTCAAGCT CGGCACTTCC
GACCTCAATG GTTACGTGCA GGTGCGCGAA GGGCTCAAGA ATGGGGACCA GGTTGTGACC
TATAGCGAAA AGGCACTGAC GGCGCGCAGC CGCATCCATG TGGTCGACCA TATCCCAGGA
GTGTCACGAT GA
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| Protein sequence | MKKLPLQGRT LALLAVIIPL LVLFIYVGLR SGPLAPVAVT VASVESRAIT PALFGIGTVE
ARYTYKIGPT FAGRVKRLEV HVGDQVKAGQ VLGEMEPVDL DDRVRSQESA FKRAEAALRE
AEARQAYAQT QARRYEQLFA VRSTSEEIVT TKRQELQIAD AALSAAREDI VRARSDREGL
VAQRSNLRLI APVDGVVAVR DADPGTTIVA GQAVVEVIDP KSLWINARFD QISASGLAGG
LPTLIVLRSR GGQTLKGRVL RVEPKADAVT EETLAKVTFD NKPEPLPPVG ELAEVTVDLP
ALPAAPLIPN AAVQREGDKV GVWQIVDGDL HFSPVKLGTS DLNGYVQVRE GLKNGDQVVT
YSEKALTARS RIHVVDHIPG VSR
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