| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2635 |
|---|
| Symbol | |
|---|
| ID | 5748205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 2901146 |
|---|
| End bp | 2902003 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641297724 |
|---|
| Product | baseplate J family protein |
|---|
| Protein accession | YP_001563658 |
|---|
| Protein GI | 160898076 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3948] Phage-related baseplate assembly protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0882929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.000285903 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAG ACATGACCCC TGCACTGGAT GCCCTGCCGC CGCCCGGCGT CGTCGAGACG
CTGGATTTCG AGCGCATCCT CGACGCCCAC CGCGCCGATC TGCTGGCGCG CCACCCCGAG
GCCGCCGAGG TCCTGGCGCT GGAGAGCGAG CCGCTCAACA AGCTGCTGGA GGCGCACGCC
TACCGCGAGC TGCTGTACCG GGCGCGCGTC AATGATGTGG CGCGTGCGCA TTTGATTGCG
TTCGCCCAGG GCTCGGACCT GGACCACAAG GGCGCCTTCT ATGACGTGGC CCGACTGCCC
GGGGAAAGCG ACGAACGCTA CCGCCAGCGC ATCCTGCTGC GCGTGCGCGC GCTGGCCGGC
AGCGGCACGG CCGAGCACTA CGAGCACCTG GCCATGACGG CCAGCGCCAA TGTGCACAGC
GCCATTGCCA CACAACCCCA GCCCGGCCGC GTGAGCGTGC AGCTGTGGCT GGTCGAGCCC
GCACAGGCCG AAGAGACGCT GGCCATCGTG CTGTCGGCCC TCAATGCGCC AGGCGCACGG
CCGCTGGGCG TGCCCGTGTC GGTATCGCTG GCGCGCCCGC ACCCCATCGA CATCACGGCA
CACCTGCTGC GCGAGCCCGG TGCGCCCGTG GACATCGTGG CGCGCCTGCA GGCCGGCCTG
GCCGCCCAGA TTGCAGCCTA CGCGCTGCTG GGCCGCGATG TGCCGCGCTC GTGGATCACC
ACGCGCCTGC ATGTGGACGG CATTGCCCGC GTCACCTACC CCGACGCCCA GGCCCCGGCC
GAGCTCACGC CGCTGGCCGC CGACGAATAC CCGGTGCTGG GCCGAGTGCA GCTGGTGGAC
GAGGGCCTGC AGGCATGA
|
|---|
| Protein sequence | MKQDMTPALD ALPPPGVVET LDFERILDAH RADLLARHPE AAEVLALESE PLNKLLEAHA
YRELLYRARV NDVARAHLIA FAQGSDLDHK GAFYDVARLP GESDERYRQR ILLRVRALAG
SGTAEHYEHL AMTASANVHS AIATQPQPGR VSVQLWLVEP AQAEETLAIV LSALNAPGAR
PLGVPVSVSL ARPHPIDITA HLLREPGAPV DIVARLQAGL AAQIAAYALL GRDVPRSWIT
TRLHVDGIAR VTYPDAQAPA ELTPLAADEY PVLGRVQLVD EGLQA
|
|---|
| |