| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2573 |
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| Symbol | |
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| ID | 5748142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2846258 |
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| End bp | 2847142 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297661 |
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| Product | squalene synthase HpnC |
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| Protein accession | YP_001563596 |
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| Protein GI | 160898014 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0283707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTCCA CCGCTCCCAC CCTGCCCGCC TCCCCCGCCC CGGTCACGCA CTACGAGAAC
TTTCCCGTGG CGTCCTGGCT GTGCCCGCCC CGCTTGCGCC CGCCGATTGC CGCGCTCTAC
CACTTCGCAC GCACTGCAGA CGATCTGGCC GACGAGGGCG ACGCCACGCC CCCCGAGCGC
CTGGCCGCGC TGGCCGCCTA CCGTGCCGAC CTGATGGCGC TGGGCACCGA AGGCGAGGCC
TCCATGCTCG CCCGCACAGC CTGGCCTCTT GTCTTTGCAG GACTGGCGCC GCAAGTACGC
GCCCACCAGC TGCCGCTGGC GCTGATGGAC GACCTGCTCA GCGCCTTCGC GCAGGACGTG
CACAAGACCG AATCCGGCAC CACCTACGCC GACCGCGCCG AGCTGCTTGA CTACTGCCGC
CGCTCGGCCA ACCCCGTGGG CCGGTTGCTG CTGCATCTGT ACGGGGTGGA TGATGCCGAA
TCGCTGGCCC GCAGCGACGC CATCTGCACC GCCCTGCAAT TGATCAATTT CTGGCAGGAC
TTCAGCGTGG ACCTGCCACG CCAGCGCCAC TACCTGACCG ATGCCGACTG CGCCGCCCAC
GGCGTGCGGC TTGAAGACCT GCGCGCCAAG CCCGCTGCAC TGACCCCTGC CGTGCGCGCG
CTGTTGGCCG ACCAATCGGC ATGGGCGCGC GCCCTGATGC TGTCTGGCGC ACCGCTGGTG
CACCGCCTGC CGGGCCGCAT CGGCTGGGAG CTGCGTCTGG TGGTGCAGGG CGGGCTGCGC
ATCCTGGACA AGGTCGATGC ACTGCAGGGC GCCAGCCTCT ACCGCCGCCC CACCGTCGGC
AAGGCCGATG CCCCGCTGCT GCTGTGGCGC GCCCTGCGCA TGTGA
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| Protein sequence | MKSTAPTLPA SPAPVTHYEN FPVASWLCPP RLRPPIAALY HFARTADDLA DEGDATPPER
LAALAAYRAD LMALGTEGEA SMLARTAWPL VFAGLAPQVR AHQLPLALMD DLLSAFAQDV
HKTESGTTYA DRAELLDYCR RSANPVGRLL LHLYGVDDAE SLARSDAICT ALQLINFWQD
FSVDLPRQRH YLTDADCAAH GVRLEDLRAK PAALTPAVRA LLADQSAWAR ALMLSGAPLV
HRLPGRIGWE LRLVVQGGLR ILDKVDALQG ASLYRRPTVG KADAPLLLWR ALRM
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