| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2513 |
|---|
| Symbol | |
|---|
| ID | 5748082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2782370 |
|---|
| End bp | 2783797 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641297601 |
|---|
| Product | guanine deaminase |
|---|
| Protein accession | YP_001563536 |
|---|
| Protein GI | 160897954 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | [TIGR02967] guanine deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.713294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATT GCGCTGACCC TGGCCGGGGC TGGGCCCTGT TGTGTACTGC TTTCGATGCG
CCCGTGCCGG ATGCGCTGCG CATCCAGCAG GACGTGCTGA TCATGGTGGA TAGCCGCGGC
ATGATCGATG CCGTGCTGGA GCGCGGTGAT TCCCGCCGCG CCGCTCTGGA GGCCGCGCAT
GCGGCCGCAG GCACGCTGCA GCGCCTGCCC GAGGGCCAGT ACCTTTTGCC CGGCATGGTG
GACCTGCATG TGCATGCACC GCAATGGCCG CAAAGCGGCA AGGCCCTGGA TGTGCCGCTG
GAAACCTGGC TGCAGGAGTA CACCTTTCCC CTGGAAGCGC GCTACGGCGA TGCCGGCTTT
GCCACATCGG TCTACGACAG CGTGGTGCGC ACGCTGCTGG CCAATGGCAC GACGACGGCC
ATGTACTTCG GCACCATCCA CGCCGTGGGC AACCAGGTGC TGGCCGAACG CTGCCTGGCC
CTGGGCCAGC GCGCCCTGGT GGGCAAGGTG GCGATGGACG AGCCGTCGCA ATGCCCCCCG
TACTACAAGG ACGGCAGCGC CGCCGAAGGC ATTGCCGAGA CGGCACGCTT CATCGACTGG
CTGCGCCAGC ATCCGGACAA CGCGCAGCAG CGCGTGCTGC CGGTGATCAC GCCGCGCTTC
ATTCCTTCGT GCACCGACGA GCTGCTGCGC GGGCTGGGCG ACCTGGCTGG ACGCACCGGC
GCCCATGTGC AAACCCATTG CTCCGAGAGC GACTGGGCGC ATGCCCATGT GCTGGAACGC
CAGGGCCGCA CCGATGCGCA TGCGCTGCAT GATTTCGGCC TGCTCACGCG CCGCACGGTG
GTGGCCCATG CCAACTTCCT CACGGCCGAT GACGTGGCGC TGATGGCGCG CACGGGCGCC
TCGGTCGCGC ACTGCCCTCT GTCCAACTTC TATTTCGCCA ACAGCGTGTT CCCGGCCCGC
AGCGGCCGTG AGCAGGGCCT GGGCATGGGG TTGGCCACGG ACATCTCGGG CGGCTACAGC
CCCAGCATGT TCGATGCCTG CCGCCACGCC ATGACGGCCT CGCTGGCCTT GCATGAGGGG
GTTGACCCGG CCCTTGGCGC TTCGCAGCGC GGCAGGGTGG GGCAGGGCGT GCAGGCCCGC
ATCGACCACG TTTTTGCGCT GTGGCTGGCC ACGGCGGCGG GGGGCGATGC GCTGGACCTG
CCGATTGGCC GCATCGAGCC CGGCCACGCC ATGGACGCCC TGGCCATCGA CTGCCAGGGG
CCTGACTCCA ATGTCCAGAT CTGGCCCGGC GCGGATGGCC CGGCCGACAT TCTGCAAAAG
ATCATCCACC ACGCCACGCG CGCCAATGTG GCCAGCACCT GGGTGCAGGG CGAGTGCGTG
CACCGGCGCC AGGCCGCCAG CGCGGTCAGC GCTGTCACTG CTGTCTGA
|
|---|
| Protein sequence | MMNCADPGRG WALLCTAFDA PVPDALRIQQ DVLIMVDSRG MIDAVLERGD SRRAALEAAH
AAAGTLQRLP EGQYLLPGMV DLHVHAPQWP QSGKALDVPL ETWLQEYTFP LEARYGDAGF
ATSVYDSVVR TLLANGTTTA MYFGTIHAVG NQVLAERCLA LGQRALVGKV AMDEPSQCPP
YYKDGSAAEG IAETARFIDW LRQHPDNAQQ RVLPVITPRF IPSCTDELLR GLGDLAGRTG
AHVQTHCSES DWAHAHVLER QGRTDAHALH DFGLLTRRTV VAHANFLTAD DVALMARTGA
SVAHCPLSNF YFANSVFPAR SGREQGLGMG LATDISGGYS PSMFDACRHA MTASLALHEG
VDPALGASQR GRVGQGVQAR IDHVFALWLA TAAGGDALDL PIGRIEPGHA MDALAIDCQG
PDSNVQIWPG ADGPADILQK IIHHATRANV ASTWVQGECV HRRQAASAVS AVTAV
|
|---|
| |