| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2506 |
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| Symbol | |
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| ID | 5748069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2768932 |
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| End bp | 2769591 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641297588 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001563529 |
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| Protein GI | 160897947 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.958225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGCA GGGAGCAGGA GCGGCAGGCG CAGAGCCCGT GTGACCCAGC ACACCCCTCA
GCTACAATTG ACCGCAGTAT AAGCCCGCGC CGCGGGGCAT TCCCCCGAGG CCCCGAAAGC
ACCTACATGC CTCTACGCAA CTCGTTTCGC TCCGCCCTGC GCCTCGCGGC ACTGGCGGCC
CTGCTCGCAA CAGGCCACGC CCACGCCGAC GACTATACGG AAGTGAATCA GTTGCTGCGC
AACGGCAAGA GCACCCAGGC GCTGGCACGC GCCGATGCCT ATCTGGCCAA GAACGCACGC
GACCCGCAGA TGCGCTTTCT CAAGGCGGTT GCACTGACCG ACAGCGGCAA GACAGACGAG
GCCATCGCCG CGCTGAATCA GCTCATCGAG GACTACCCCG AGCTGCCCGA GCCCTACAAC
AATCTGGCGG TCATCTATGC CGGCCAGAAC CAGCTCGACA AGGCGCGCTC CGCGCTCGAA
TCCGCCGTGC GCAACAACCC CAACTACGGC GTCGCCTACG AGAACCTGGG CGACATCCAT
GCCCGCCTGG CCTACGAGGC CTACTCCAAG GCGCAAGGCC TGGATGGCCG CGCGGCCAGC
GTGCGCCCCA AACTCAAGCT GCTGCGCGAC CTGCTGGCGC CCGTCACCGC CGCCAAGTAG
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| Protein sequence | MLSREQERQA QSPCDPAHPS ATIDRSISPR RGAFPRGPES TYMPLRNSFR SALRLAALAA
LLATGHAHAD DYTEVNQLLR NGKSTQALAR ADAYLAKNAR DPQMRFLKAV ALTDSGKTDE
AIAALNQLIE DYPELPEPYN NLAVIYAGQN QLDKARSALE SAVRNNPNYG VAYENLGDIH
ARLAYEAYSK AQGLDGRAAS VRPKLKLLRD LLAPVTAAK
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