Gene Daci_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2488 
Symbol 
ID5748051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2749937 
End bp2750653 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content70% 
IMG OID641297570 
Productmethyltransferase type 12 
Protein accessionYP_001563511 
Protein GI160897929 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.363231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.776632 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAG CCTTGCCACA GGCGGCTTCC GCCGCCAAGT TCGACACCTC CCGCGCGGCC 
GAGTACGAAA CGCAAAGCCG CATCGCACTG GCCGGCTACG ACGCCTGCCA CGAGCTGGCC
GCCTGCCTGC TGGCCGCCAG CCTGGATGCC GACCCGAAGT CCGTGCTGAT TGGCGGCGCC
GGCGGCACGG GCCAGGAGAT CCTGGCCACG GCGCGGCTCA GGCCGCAGTG GAAATTCACG
GCTGCCGACC CCTCGGACCC CATGCTGGAC CAGACCATGG ACCGCATCGC CGCGGCGGGG
CTGTCGGCCC AGGTGCAGGC CGCTGCCTGC GCCGTGCAGG ACCTGCCGGC CGGCACGGTG
TTCGACGCGG CCACGCTGAT CGGCGTGCTG CACCACGTCC CTGACGACGC AGACAAGCTG
CAGCTGCTGC AGGCCCTGTC AGCGCGGCTG GCGCCGGGGG CGCCCTTCAT CCTGGCCTGC
AATCGCCACC GCTATGACAG CGAGCCGCTG TTCCTTGAAG CCTGGGCCAT GCGCTGGCGC
ATGGCGGGCG TGGACGAGGC CGCTGTCCAT GCGAAACTCG GCAAAATCCG GCAGGGCGCG
GTTCCACCGG CCTCGGAAGA GGCGGTGGAG CAGATGCTGG CCCAGGCCGG TTTCGTGCAG
CCCAAGCGCT TTTTCTCCAG CCTGTTCTGG TGTGCCTGGA TTGCCTTCAA GGCCTGA
 
Protein sequence
MNQALPQAAS AAKFDTSRAA EYETQSRIAL AGYDACHELA ACLLAASLDA DPKSVLIGGA 
GGTGQEILAT ARLRPQWKFT AADPSDPMLD QTMDRIAAAG LSAQVQAAAC AVQDLPAGTV
FDAATLIGVL HHVPDDADKL QLLQALSARL APGAPFILAC NRHRYDSEPL FLEAWAMRWR
MAGVDEAAVH AKLGKIRQGA VPPASEEAVE QMLAQAGFVQ PKRFFSSLFW CAWIAFKA