| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2360 |
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| Symbol | |
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| ID | 5747923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2601144 |
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| End bp | 2602232 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297442 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_001563383 |
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| Protein GI | 160897801 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.349605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACA CATTCAAGAT CGCCGTCATC GCCGGTGACG GCATTGGCAA GGAAGTCATG
CCCGAAGGCC TGCGCACGCT GGAGGCCGCC GCCAGCCGCT TTGCGATCAA GCTCGAATTC
CACCATTTCG ACTGGGCCCA CTGCGACTAC TACCTGGCCC ACGGAAAAAT GATGCCCGAC
GACTGGAAGG CGCAGCTCTG CGGCATGGAC GCCATCTTCT TCGGCGCCGT GGGCTGGCCC
GCCACCGTGC CCGACCATGT CTCGCTGTGG GGCTCGCTGC TCAAGTTCCG CCGCGAGTTC
GACCAGTACA TCAACCTGCG CCCCGTGCGC CTGTTCGAGG GCGTGCCCTG CCCGCTGGCC
GGCCGCAAGC CCGGCGACAT CGACTACTAC GTGGTGCGCG AGAACACCGA AGGCGAATAC
ACCTCGCTGG GCGGCATCAT GTACGAGGGC ACGGACCGCG AGATCGTGAT CCAGGAATCG
GTCTACTCGC GCAAGGGTGC CGAGCGCCTG CTCAAGTACG CCTTCGACCT GGCCCAAAGC
CGCGAGCGCA AGCACGTCAC CCTGGCCACC AAGAGCAACG GCATCGCCAT CAGCATGCCC
TGGTGGGACC GGCGCGCCGA GGACGTGGCC AAGGCCTACC CGGACGTCAC GCTGGACAAG
CAGCACATCG ACATCCTGAC CGCGCGCTTC GTGCTGCAGC CGGGCCGCTT CGACGTGGTG
GCCGCCACCA ACCTGTTCGG CGACATCCTC AGCGACCTGG GACCGGCCAC CACGGGCACC
ATCGGCCTGG CCCCCTCGGC CAACCTCAAT CCCGACCGCA GCTTCCCCAG CCTGTTCGAG
CCCGTGCACG GCTCGGCGCC CGACATCTAC GGCAAGAACA TCGCCAACCC CATCGCCATG
GTCTGGTCGG CAGCGCTGAT GCTGGACTTC CTGACCCACG GCCAGGGCGC AGGCCGCGCG
GCGCACGACG CCATCGTCTC GGCCATCGAG GAAGTCATCA AGAACGGCCC CCGCACGCCC
GACCTGGGCG GCACGGCCAG CACCACCGAA GTGGGCCAGG CCATCGCGGC GCAGATCGCG
GGCAAGTAG
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| Protein sequence | MQDTFKIAVI AGDGIGKEVM PEGLRTLEAA ASRFAIKLEF HHFDWAHCDY YLAHGKMMPD
DWKAQLCGMD AIFFGAVGWP ATVPDHVSLW GSLLKFRREF DQYINLRPVR LFEGVPCPLA
GRKPGDIDYY VVRENTEGEY TSLGGIMYEG TDREIVIQES VYSRKGAERL LKYAFDLAQS
RERKHVTLAT KSNGIAISMP WWDRRAEDVA KAYPDVTLDK QHIDILTARF VLQPGRFDVV
AATNLFGDIL SDLGPATTGT IGLAPSANLN PDRSFPSLFE PVHGSAPDIY GKNIANPIAM
VWSAALMLDF LTHGQGAGRA AHDAIVSAIE EVIKNGPRTP DLGGTASTTE VGQAIAAQIA
GK
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