| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2310 |
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| Symbol | |
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| ID | 5747873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2541063 |
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| End bp | 2541890 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641297392 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_001563333 |
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| Protein GI | 160897751 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.222945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC GATTCGTACT GATAGAAACC AGCCACGCCG GCAATGTGGG CGCCGCCGCC
CGCGCCCTGA AGACCATGGG CTTTGACGAC CTGGTGCTGG TGCGCCCGCG CTGGCCCAAC
GTGCTGCGCA AGGAAGAGAC CATCCAGCGG GCCAGCGGCG CGCTGGACGT GCTGGGCAAT
GCGCGCGTGG TCGAGACGCT GGAGGAGGCG CTGGACGGCA TCAGCCACCT GTGCGCCACG
GCCATGACGC CGCGCGACTT CGGCCCGCCC ACGCGCACGC CGCGCCAGCA TTTCGAGCTG
CTGCTCAGCG GGGCGCTGGA TGTGCTGGCT GCGCCCGATG TGTCCGATGC GGCCGATGAA
GCGGCACCGC CCACCGATGC ATCCGTGTCC GCACCGGCTC CCGCGCCGCG CTGCAACCAG
TCCGGCGTGG CCTTCCTGTT CGGCTGCGAG CGCTTCGGCA TGAGCAACGA CGATGTCTAC
CGCAGCGATG TGGCGCTGTC GATTCCGTCC AATCCGCAGT TCGGCTCGCT GAACCTGGGG
GCAGCCATCC AGGTGGTGGC CTATGAGTGG CGCCAGGCGC TGGGCGGCTT TCCCGTGGTG
GAGCACACGC CTGCGCCGCA GCGCGCCGAC GCGGCCCAGG TGGCCGGCAT GCTGGGCCAC
TGGGAGCAGG CGCTGGCGCA TATCGGCTTT CTCGATCCGG CCGCGCCCAA GAAGCTGATG
CCGCGCCTCA ACCAGCTTTT CAACCGCTCG CAACTGACCG CCGAGGAAAT CCACATCCTG
CGCGGTGTTG CGAAGGCCAT GCTGCAGAGC ACCCCACCGA AACGCTAG
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| Protein sequence | MKTRFVLIET SHAGNVGAAA RALKTMGFDD LVLVRPRWPN VLRKEETIQR ASGALDVLGN
ARVVETLEEA LDGISHLCAT AMTPRDFGPP TRTPRQHFEL LLSGALDVLA APDVSDAADE
AAPPTDASVS APAPAPRCNQ SGVAFLFGCE RFGMSNDDVY RSDVALSIPS NPQFGSLNLG
AAIQVVAYEW RQALGGFPVV EHTPAPQRAD AAQVAGMLGH WEQALAHIGF LDPAAPKKLM
PRLNQLFNRS QLTAEEIHIL RGVAKAMLQS TPPKR
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