Gene Daci_2286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2286 
Symbol 
ID5747849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2514723 
End bp2515715 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content68% 
IMG OID641297369 
Producthypothetical protein 
Protein accessionYP_001563310 
Protein GI160897728 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.53441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00876567 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATGCAT ATCCATCACC CGCATCTCGC AGATGCCTGC TTTCGGCCTT CTGCGCGGCA 
GCGCTGGCGG CCGCAGCCGG CGCCCCGGCG CTGGCCCAGG GCACGGACGC GTTTCCCGAG
CGGGAACTGA CCCTGATCAT CAACTACGGC GCAGGCGGCA ATACCGACGT GGCCTCGCGC
GCCATCGGCA ATGCCATGGA GGGCCTGCTC AAGAAGCCCG TGGTGCCCAA CAACCGCGCG
GGGGCGCAGG GCACGCTGGG CGTCTCGTCG CTGGCCCGGC AAAAGCCCGA CGGCTATACG
CTGGGCGTGG TGACGTTTTC GACCATCGCC ATCACGCCCC ACCTCATGAA GGTGGACTAC
AAGGTCGATG ACTTCGACTT CATCGCAGGC GTGGCCCGCT ACCGCTATGG CGTGGCCGTG
CGCGCAGACT CGCCCTACAA GACCATGGCC GACCTGGTGG CCGCGTCCCG CCAGGGCAAG
GGCATCTTCT TCGGCGCGCC GTCCGCGCCC AACAACCTGG CCATGTACGA GCTGGGGCGC
AAGACGGGCG GCAGGTTCGA GGAGATCAAC TACAAGTCCG GCGCCGAGAC CGTGGCCGGC
CTGATCGGCG GTCAGGTGGA CGTCATCGTG CAGAACCCTT CGGACATCGT CCAGCACGTC
AAGGCCGGAA AAATGCGCCT GCTGGCCAGC GCCAGCCCCA TGCGCTGGAA GGAGTTGCCC
GAGGTGCCCA CGCTCAGGGA GCAGGGCTAC GACGTGGAGA TCGACTCCTG GATCGGCCTG
GCCTACCCCA AGGGCGTACC CCCGGCCCTG CGCGACAGGC TGGAGCGCGT CGCCATGGCA
GCTGCCGAGG GCCCCCAGGT GGCGCGCATC TTCGAGTCAG CCGGCGTGGA CCCGGCGCCG
CTCACTGGCG CCGAATACCG CAGAAAGCTG GTCCAGGGCC ATGAGTCCAT GGGCGCGGCC
ATCAAGGCGG CGAATCTGCC GCGCATGAAC TGA
 
Protein sequence
MHAYPSPASR RCLLSAFCAA ALAAAAGAPA LAQGTDAFPE RELTLIINYG AGGNTDVASR 
AIGNAMEGLL KKPVVPNNRA GAQGTLGVSS LARQKPDGYT LGVVTFSTIA ITPHLMKVDY
KVDDFDFIAG VARYRYGVAV RADSPYKTMA DLVAASRQGK GIFFGAPSAP NNLAMYELGR
KTGGRFEEIN YKSGAETVAG LIGGQVDVIV QNPSDIVQHV KAGKMRLLAS ASPMRWKELP
EVPTLREQGY DVEIDSWIGL AYPKGVPPAL RDRLERVAMA AAEGPQVARI FESAGVDPAP
LTGAEYRRKL VQGHESMGAA IKAANLPRMN