Gene Daci_2241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2241 
Symbol 
ID5747804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2458774 
End bp2459724 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content72% 
IMG OID641297325 
Productpolyprenyl synthetase 
Protein accessionYP_001563266 
Protein GI160897684 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.376008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0529545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCG TGATGACTTG CGCTTCCGAT GTTTCCCAGC CGGCCGGCCC CGGCGCGCTG 
GATTTCCCCT GCTGGATGAC CGATCGCCTG GCGCGCACCG AAAGCGCGCT GTCGCAATGG
GTGGGCGTGG ATGCGCCCGC AGGCCTGGGC GAGGCCATGC GCTACGCCGT GCTCGATGGC
GGCAAGCGCC TGCGCCCGCT GCTGGTCTGG GCCGCCGCCG AGGCCGTCGA TGGCCTGCAG
CCCGCCGCCG TGCGTGCCGG CTGCGCGGTG GAGCTAATCC ATGCCTATTC GCTGGTGCAC
GACGACATGC CCTGCATGGA CAACGACGTG CTGCGCCGTG GCAAGCCCAC GGTGCATGTG
CAGTTCGGCG AAGCCTCGGC CCTGCTGGCT GGCGATGCGC TGCAGGCGCT GGCCTTCGAG
CTGCTCGTTC CCGAGCCCGA TCAGGCCGGC AGCATGCCGG ACGCCCTGCA GGCGCGGCTG
TGCCGGCTGC TGGGCCGTGC CGCAGGCGCG CAGGGCATGG CCGGTGGCCA GGCCATCGAC
CTGGCCAGCG TGGGCCTGCA ACTGAGCGAG GCCCAGCTGC GCGAGATGCA CCGCCTCAAG
ACCGGCGCCC TGCTGCATGC CAGCGTGCTC ATGGGCGCGG CCTGCAAGGA GGGCGTGGAT
GCCCAGGCCT GGCAGGCGCT GTCCGACTAC GGGCAGGCGC TGGGCGTGGC CTTCCAGGTG
GTGGATGACA TCCTCGACGT GGTGGCCGAC TCGGCCACCC TGGGCAAGAC GGCCGGCAAG
GACGCGGCCA ACGACAAGCC GACCTACGTC TCGCTGCTGG GCCTGGACCA GGCCCGCGCC
CATGCCGACG AGCTATGCGC CCTGGCGCAC GCGGCGCTTG CGCGCAGCGG CCTGCCTGAT
ACCCGCGCGT TGGCGGCGCT TGCCGACATG GTGGTGAGCC GCACCCACTG A
 
Protein sequence
MSAVMTCASD VSQPAGPGAL DFPCWMTDRL ARTESALSQW VGVDAPAGLG EAMRYAVLDG 
GKRLRPLLVW AAAEAVDGLQ PAAVRAGCAV ELIHAYSLVH DDMPCMDNDV LRRGKPTVHV
QFGEASALLA GDALQALAFE LLVPEPDQAG SMPDALQARL CRLLGRAAGA QGMAGGQAID
LASVGLQLSE AQLREMHRLK TGALLHASVL MGAACKEGVD AQAWQALSDY GQALGVAFQV
VDDILDVVAD SATLGKTAGK DAANDKPTYV SLLGLDQARA HADELCALAH AALARSGLPD
TRALAALADM VVSRTH