Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2241 |
Symbol | |
ID | 5747804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2458774 |
End bp | 2459724 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641297325 |
Product | polyprenyl synthetase |
Protein accession | YP_001563266 |
Protein GI | 160897684 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.376008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0529545 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCG TGATGACTTG CGCTTCCGAT GTTTCCCAGC CGGCCGGCCC CGGCGCGCTG GATTTCCCCT GCTGGATGAC CGATCGCCTG GCGCGCACCG AAAGCGCGCT GTCGCAATGG GTGGGCGTGG ATGCGCCCGC AGGCCTGGGC GAGGCCATGC GCTACGCCGT GCTCGATGGC GGCAAGCGCC TGCGCCCGCT GCTGGTCTGG GCCGCCGCCG AGGCCGTCGA TGGCCTGCAG CCCGCCGCCG TGCGTGCCGG CTGCGCGGTG GAGCTAATCC ATGCCTATTC GCTGGTGCAC GACGACATGC CCTGCATGGA CAACGACGTG CTGCGCCGTG GCAAGCCCAC GGTGCATGTG CAGTTCGGCG AAGCCTCGGC CCTGCTGGCT GGCGATGCGC TGCAGGCGCT GGCCTTCGAG CTGCTCGTTC CCGAGCCCGA TCAGGCCGGC AGCATGCCGG ACGCCCTGCA GGCGCGGCTG TGCCGGCTGC TGGGCCGTGC CGCAGGCGCG CAGGGCATGG CCGGTGGCCA GGCCATCGAC CTGGCCAGCG TGGGCCTGCA ACTGAGCGAG GCCCAGCTGC GCGAGATGCA CCGCCTCAAG ACCGGCGCCC TGCTGCATGC CAGCGTGCTC ATGGGCGCGG CCTGCAAGGA GGGCGTGGAT GCCCAGGCCT GGCAGGCGCT GTCCGACTAC GGGCAGGCGC TGGGCGTGGC CTTCCAGGTG GTGGATGACA TCCTCGACGT GGTGGCCGAC TCGGCCACCC TGGGCAAGAC GGCCGGCAAG GACGCGGCCA ACGACAAGCC GACCTACGTC TCGCTGCTGG GCCTGGACCA GGCCCGCGCC CATGCCGACG AGCTATGCGC CCTGGCGCAC GCGGCGCTTG CGCGCAGCGG CCTGCCTGAT ACCCGCGCGT TGGCGGCGCT TGCCGACATG GTGGTGAGCC GCACCCACTG A
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Protein sequence | MSAVMTCASD VSQPAGPGAL DFPCWMTDRL ARTESALSQW VGVDAPAGLG EAMRYAVLDG GKRLRPLLVW AAAEAVDGLQ PAAVRAGCAV ELIHAYSLVH DDMPCMDNDV LRRGKPTVHV QFGEASALLA GDALQALAFE LLVPEPDQAG SMPDALQARL CRLLGRAAGA QGMAGGQAID LASVGLQLSE AQLREMHRLK TGALLHASVL MGAACKEGVD AQAWQALSDY GQALGVAFQV VDDILDVVAD SATLGKTAGK DAANDKPTYV SLLGLDQARA HADELCALAH AALARSGLPD TRALAALADM VVSRTH
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