Gene Daci_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2238 
Symbol 
ID5747801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2455820 
End bp2456725 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID641297322 
Productputative transmembrane protein 
Protein accessionYP_001563263 
Protein GI160897681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.56405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0304872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCC TGTGGATGGT GGCGGCCGCA TTCGTTTTTG CGGTCATGAG TGTGTGTGTG 
AAGTTCGCCT CCCAGGATTT CAATGCGGCG GAAATCGTCT TCTACCGCGG GCTGGTCAGC
ATGGTGGCGC TGTGGTGGCT GGCGCGCCAC CAGGGCATCT CGCTGGCCAC GCGCTACCCG
CGCGAGCATG CCTGGCGCAG CTTCGTGGGC GTGACGTCCA TGGGCGCCTG GTTCTACTCC
ATCGGCCATC TGCCGCTGGC CACGGCCGCC ACGTTCAACT CCATGAGCAG CATCTGGATG
GCGGTCTTTC TGATCGGCCA GGGCCTGCTG CTGCGCCACC AGCTGCGCCG CCAGCCCGAA
TCGCATGCGC TGCGCGCGCT GCCGCCGTTT CCCTGGAGCC TGGTCGCCAC CGTGGCCCTG
GGCTTCGTGG GCGTGATCCT GGTGCTGCGC CCCAGCGCGG CGCCGCAGGA ATTCGTGGCC
AGCGCGGGCG GCCTGATCGG CGGGGTGTTC GCCGCCATGG CCTATATGCA GGTGGCCACG
CTGTCGCGCA TGGGCGAGCC CGAGGCGCGC GTGGTCTTCT ACTTCGCACT GGGCTCGGCC
GTGGCCGGTG CCCTGGCCAT GTGCTTCACG GGCGTGTCCG CCTGGCCGGG CTGGCGCGCG
CTGTGGCTGC TGCCCGTGGG CGTGCTGGCC GCCGTGGCCC AGGTCTGCAT GACGGCGGCC
TACGCCTCGG CCAGCAACAG CCGCAACACC CTGGTCGTGG CCAACCTGCA GTATTCGGGC
ATCGTCTTCG CGGCCCTGCT GAGCCTGGCG ATGTTCGGCG AAAGCGTGCC GCTGATCGGC
TGGGCCGGCA TTGCCCTGAT CGTGGCCAGC GGCGCCCTGG CCACGGCCCT GCGTTCGCGC
GGCTGA
 
Protein sequence
MQALWMVAAA FVFAVMSVCV KFASQDFNAA EIVFYRGLVS MVALWWLARH QGISLATRYP 
REHAWRSFVG VTSMGAWFYS IGHLPLATAA TFNSMSSIWM AVFLIGQGLL LRHQLRRQPE
SHALRALPPF PWSLVATVAL GFVGVILVLR PSAAPQEFVA SAGGLIGGVF AAMAYMQVAT
LSRMGEPEAR VVFYFALGSA VAGALAMCFT GVSAWPGWRA LWLLPVGVLA AVAQVCMTAA
YASASNSRNT LVVANLQYSG IVFAALLSLA MFGESVPLIG WAGIALIVAS GALATALRSR
G