Gene Daci_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2213 
Symbol 
ID5747776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2426860 
End bp2427462 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID641297297 
ProductNUDIX hydrolase 
Protein accessionYP_001563238 
Protein GI160897656 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.254598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTATG AAACCCGCTA TTGCACGCAC TGCGCAACGC CCCTGCAGTG GGTGATCCAG 
GCCGAGGACG GCGGCGATGT ATCGCGCCTG CGCTGCCCCG AGTGCGGCTG GACGCACTGG
AACAATCCCA CGCCGGTGCT GGCCGCCATC GTGGAGCTGG ACGGCAAGGT GCTGCTGGCG
CGCAATGCGG CCTGGCCCGA GAAGGTCTTC GGCCTGATCA CGGGCTTCAT GGAAGCCGGC
GAGTCGCCCG AGGAGGGCGT GGCACGCGAG GTGGCGGAGG AAACCGGCCT GCAGGCCGAG
TCGCTGGAGC TGATCAGCGT GCATGAGTTC CTGCGCATGA ACCAGGTGAT CATCGCCTTC
CATGTGCGCG CCAGCGGCCA GGTGCGGCTG TCGCCCGAGC TGCTCGAGTA CCGCCTGCTG
GAGCCCGAGA AAGTCCAGGC CTGGCCTTCG GGCACGGGCA TGGCGCTGGC CAAGTGGCTG
CGCAGCCAGG GGCATGATCC TGTGATCCGT GACTTCTGGA AGCGTGCCGA GCAGGCCCAG
GAGGCTGAAG CGAGTCGCGC CGATCAAGAC ACTGCTGCTG GCCTCAGCCG CGATGCCGCC
TAG
 
Protein sequence
MHYETRYCTH CATPLQWVIQ AEDGGDVSRL RCPECGWTHW NNPTPVLAAI VELDGKVLLA 
RNAAWPEKVF GLITGFMEAG ESPEEGVARE VAEETGLQAE SLELISVHEF LRMNQVIIAF
HVRASGQVRL SPELLEYRLL EPEKVQAWPS GTGMALAKWL RSQGHDPVIR DFWKRAEQAQ
EAEASRADQD TAAGLSRDAA