| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2188 |
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| Symbol | |
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| ID | 5747750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2401180 |
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| End bp | 2402769 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641297271 |
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| Product | poly(A) polymerase |
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| Protein accession | YP_001563213 |
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| Protein GI | 160897631 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.891467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.883009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA ACATCATCGA CAAGCTGCTG GGCAAGACCT CGGCTGCCCC CCGCGCCCGC
AAGTCCCCCT TCGGCAAGCG CCAGGAAGTG CCCGTGCAGG TGCACGGCAT CGACCCCAAC
CTGGTGGACC GGCGTGCCAT CGACGTGGTC GAGACGCTGC AGGACGCCGG CTACGAGGCC
TACATCGTCG GCGGCGCCGT GCGCGACCTG CTGCTGGGCC TGCGCCCCAA GGACTTCGAC
GTGGCCACCA ATGCCACGCC CGAGCAGGTC AAGGGCCTGT TCCGCCGCGC CTTCATCATC
GGCAAGCGCT TTCGCATCGT GCACGTGGTC TATGGCCGCG GGCGCGAGAA CGAGGTCATC
GAAGTCTCCA CCTTCCGCGC CTTCCTGGAC AACAGCGCGG CCGAGGCCGT GAGCGGCAAC
GAGCGCACCA GCAAGGCCCA GCTCGCCGGC ATGCACCATG CGGTGGACGC CAGCGGCCGC
GTGCTGCGCG ACAACGTCTG GGGCCCGCAG GACCAGGACG CCACGCGCCG CGACTTCACC
ATCAACGCCA TGTACTACGA CCCGCGCACG CAGATCGTGG TGGACTATCA CAAGGGCATC
GACGACGCCA AGAAGCGCAT GCTGCGCATG ATCGGCGACC CGGCCACGCG CTACCGCGAA
GACCCGGTGC GCATCATCCG CGCCGTGCGC TTCGCGGCCA AGCTGGCGGG CAAGGGCTTC
AAGATCGAGC CCAAGACCGC CAAGCCCCTG GTGGAGTGCG AGCCGCTGCT GGCCGATGTG
CCGCAAAGCC GCCTGTTCGA TGAAATGCTC AAGCTGCTGC AGACCGGCCA CGCGCTGGCC
TCGGTGGAGC AGTTGCGCGG CCTGGGCCTG GCACGCGGCA TCTACTCGCT GCTGGATGTG
GTGGTCGAGC GCGCGGAGCA GCCCTTTGTG CGCGCCGCGC TGACCGACAC CGACCGCCGT
GTCGAGGAAG GCAAGCCCGT GGCGCCCAGC TTCCTGCTGG CCTGCGTGCT GTGGCATGAC
GTCAAGACCG GCTGGGAACG CCGCCTGAAC CAGCGCCAGC ACCCCTTCCC CGCGCTGCAG
GAATCCATCG ACGAAGTGTT CGACCAGCGC ATCGGCGATG TCTCGGGCCG CGGCAAGCTG
GCCGCCGACA TGCGCGAGAT CTGGGTCATG CAGCCGCGCT TTGACAAGCG CACGGGCGCC
ACGCCGTTCA GCCTGGTGGC CCAGCCGCGC TTTCGCGCGG GCTTCGACTT CATGCGCCTG
CGCGCCGACA TCGGCGAGGT CGATGAAAGC CTGGCCAGCT GGTGGCAGGA GTTCCAGAAC
GCCGACGACG CGCGCCGCGA CGACCTGATC GCCCAGGCCC GCGACGAGCA GCGCGCCCGC
CAGCGCAGCG CCGAGCCCAA GGTGCACCGC GTGGCCAAGG CCCGCCCTGC GCGCGAGGAC
GCCGGCGCTG GCGAAGCGCA GCAGGCCGAC GCACCTGCCG CCGCCTTGCC CCAGGTGGAG
GGTGAGGAAG GGTCAGCGCC CAAGAAGCGC CGCCGCCGTC GCCGCAAGCC CCAGGGCGGT
GGTGATGGCG CCGTGGGCGG GGATGACTGA
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| Protein sequence | MIKNIIDKLL GKTSAAPRAR KSPFGKRQEV PVQVHGIDPN LVDRRAIDVV ETLQDAGYEA
YIVGGAVRDL LLGLRPKDFD VATNATPEQV KGLFRRAFII GKRFRIVHVV YGRGRENEVI
EVSTFRAFLD NSAAEAVSGN ERTSKAQLAG MHHAVDASGR VLRDNVWGPQ DQDATRRDFT
INAMYYDPRT QIVVDYHKGI DDAKKRMLRM IGDPATRYRE DPVRIIRAVR FAAKLAGKGF
KIEPKTAKPL VECEPLLADV PQSRLFDEML KLLQTGHALA SVEQLRGLGL ARGIYSLLDV
VVERAEQPFV RAALTDTDRR VEEGKPVAPS FLLACVLWHD VKTGWERRLN QRQHPFPALQ
ESIDEVFDQR IGDVSGRGKL AADMREIWVM QPRFDKRTGA TPFSLVAQPR FRAGFDFMRL
RADIGEVDES LASWWQEFQN ADDARRDDLI AQARDEQRAR QRSAEPKVHR VAKARPARED
AGAGEAQQAD APAAALPQVE GEEGSAPKKR RRRRRKPQGG GDGAVGGDD
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