Gene Daci_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2176 
Symbol 
ID5747738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2388993 
End bp2390936 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content70% 
IMG OID641297259 
Productferrous iron transport protein B 
Protein accessionYP_001563201 
Protein GI160897619 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0370] Fe2+ transport system protein B 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGT CGTCCTCTCC CAAGCTCATC CAGCCGCTGC AGCCTGCCCA GGGTGGCGGC 
GGCAGTGGTG ATTCCGCACT GCGCCTGGCC TTGCTGGGCA ACCCCAACTG CGGCAAGACG
GCCTTGTTCA ACCTGCTGAC CGGCGCACGC CAGAAGGTGG CCAACTACGC GGGCGTGACC
GTGGAGCGCA AGGAAGGCTG GCTGAGCACG GCCAGCGGCC GGCGTGTGCG CGTGCTGGAC
CTGCCGGGCA CCTACAGCCT GCACGCCCAC AGCGAGGACG AACGCATCAC GCGCGACATC
GTCTCGGGCC GCCACGCGCG CGAGGCGCCT CCCGAATTGC TGGTCTGCGT CACCGACGCC
ACCCATCTGC GCCTGAACCT GCGCCTGGTG CTGGAAGCCC AGCGCCTGGG CCTGCCCATG
CTGCTGGTGC TCAACATGAG CGACATGGCC AGGCGCCAGG GCATCGATAT CGACCGCGAG
GCGCTGTCAC GCGCCCTGGG CATGCCCGTG CTGTCCACGG TGGGCGTGCG CCAGGACGGC
GCGCGCGAAC TGCTGCAATG GCTGGACGGC CCCGAAGCGC GCGCCCTGGC GGCGCCGCAG
CTGCAGGCCC CGGCCCGCCC GGGCGATGCG CGCGAGCAGG TGCTGGCCCT GCACCAGCAG
GTGGCCCGCA TCATGGCCGA CTGCGTCAAG GAGCCCGTGG TGGACACCCG GCGCGACGAC
CGCATCGACG CCGTGGTGCT GCACCCGCTG TGGGGCATGC TGCTGCTGGC GGCCACGCTG
TTCCTGATGT TCCAGGCCGT GTTCAGCTGG GCGCAGCCGC TGATGGACGG CATCGAGGGC
GGCGTCTCGG CCGTCTCGGC CCTGGTCAAC GAGCACATGC CCGAAGGCGC GCTGCGCAGT
CTGCTGGCCG ACGGCGTGAT CGCGGGCACC GGCGCCGTGC TGGTCTTTCT GCCGCAGATC
CTGATCCTGT TCCTGTTCAT CCTTGCACTC GAGGATTCGG GCTACCTGCC GCGTGCCGCC
TTCATGCTGG ACCGCATCAT GGGCAAGGTC GGCCTGTCGG GCCGCTCCTT CATTCCGCTG
CTGTCCAGCT TCGCCTGCGC CGTGCCCGGC ATCATGGCCA CGCGCTCCAT CACCAGCTGG
CGCGACCGCC TGGTGACGAT CATGATCGCG CCGCTGATGA CCTGCTCGGC GCGCCTGCCG
GTCTATGCGC TGCTGATCAG CGCCTTCATC CCCGAGCGCA CGGTGGGCGG CATCTTCAAC
CTGCAGGGCC TGGTGCTGTT CGCGCTGTAT GTGGCCGGCA TCGCCAGCGC CATGGCCGTG
GCCGGCGTGG CCAAGTTGGC CGGCCGCAGC GCCGGACCCA CGCCGCTGCT GATGGAGCTG
CCCTCCTACC GCTGGCCCAG CCCGCGCAGC CTGGCCCTGG GCCTGTACGA GCGCGCCATG
ATCTTCCTGC GCCGCGTCGG CGGCATCATC CTGACCGTGA GCATCGTGCT GTGGTTCCTG
GCCAGCTACC CGGCGCCGCC CGATGGCGTC ACCGAAGCGG CCATCCGCTA CAGCTTTGCA
GGCCGCATCG GCGGCTGGCT GGAGGTGGTG CTGGCGCCGA TCGGCTTCAA CTGGCAGATC
GCCATCGCCC TGGTGCCCGG CATGGCCGCG CGCGAAGTGG CCGTCAGCGC CATGGGCACG
GTCTATGCCC TGTCCGCCGC CAGCGACGAG GCCATGGCCG AGCAACTGGG CCCGCTGATC
GCCCACACCT GGTCTATGGC CACGGCGCTG TCGCTGCTGG CCTGGTTCGT GTTCGCGCCC
CAGTGCATCT CCACGCTGGC CGCCGTGCGG CGCGAGACCA ACGGCTGGCG CTATCCGCTG
CTGATGACCG GCTATCTGTT CGCGCTGGCC TACCTTGCCA GCTTCATCAC CTACCGCGTG
GCCATCGCAT TGGGCGCGGG CTGA
 
Protein sequence
MSASSSPKLI QPLQPAQGGG GSGDSALRLA LLGNPNCGKT ALFNLLTGAR QKVANYAGVT 
VERKEGWLST ASGRRVRVLD LPGTYSLHAH SEDERITRDI VSGRHAREAP PELLVCVTDA
THLRLNLRLV LEAQRLGLPM LLVLNMSDMA RRQGIDIDRE ALSRALGMPV LSTVGVRQDG
ARELLQWLDG PEARALAAPQ LQAPARPGDA REQVLALHQQ VARIMADCVK EPVVDTRRDD
RIDAVVLHPL WGMLLLAATL FLMFQAVFSW AQPLMDGIEG GVSAVSALVN EHMPEGALRS
LLADGVIAGT GAVLVFLPQI LILFLFILAL EDSGYLPRAA FMLDRIMGKV GLSGRSFIPL
LSSFACAVPG IMATRSITSW RDRLVTIMIA PLMTCSARLP VYALLISAFI PERTVGGIFN
LQGLVLFALY VAGIASAMAV AGVAKLAGRS AGPTPLLMEL PSYRWPSPRS LALGLYERAM
IFLRRVGGII LTVSIVLWFL ASYPAPPDGV TEAAIRYSFA GRIGGWLEVV LAPIGFNWQI
AIALVPGMAA REVAVSAMGT VYALSAASDE AMAEQLGPLI AHTWSMATAL SLLAWFVFAP
QCISTLAAVR RETNGWRYPL LMTGYLFALA YLASFITYRV AIALGAG