| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2172 |
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| Symbol | |
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| ID | 5747734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2386045 |
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| End bp | 2387478 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297255 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001563197 |
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| Protein GI | 160897615 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.722417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCT TCGAAGACAT CGTCCAGCGC GAAGCCGGAC TCCAACAGCA GCTGTCCGCC
GGACAGATGA CCATGATCGC CATCGGCGGT GCCGTCGGCA CCGGCCTGTT CCTGGGCAGC
GGCTTTGCCA TCGGCTTCGC CGGGCCCAGC GTGCTGATCA GCTATGCCAT CGGCGCGGTG
ATTTCGCTGC TGCTCATGGG CTGCCTGGCC GAGATGACGG TGGCCCACCC GACCTCGGGC
TCGTTCGGCG CCTATGCCGA GCACTACATC GCCCCCTGGG CCGGCTTCGT GGTGCGCTAT
GCCTACTGGG CCTGCGTGGT GCTGGCCGTG GGCACCGAGG TGACGGCCGT GGGCCTGTAC
ATGGGCTACT GGTTCCCCGA GGTGCCGCGC TGGGCCTGGG TGGTGATCTT CTCGGGCGCG
CTGATCGGCG TGAACATGAT GAGCGTCAAG GCCTTCGGCG CCGTGGAGTA CAGCTTCTCC
ATGATCAAGA TCATCGCCAT CGTGGCCTTC ATCGTGGTCG GCGCCTGGGT GGTGTTCGGC
ACCCGGCCGG CCGGCGTGGG CTTTGCCAAC TACGTCAACA ACGGCGGCTT TTTCCCCAAC
GGCCTGTGGG GCACCTGGGT GGGCGTGATC ATCGCCATCT TCAGCTACCT GAGCATCGAG
ATGATCGCCG TGGCCGCTGG CGAGGCCAAG GACCCGCAGC GCGCCGTCAC CAGCGCCTTC
CGCTCCACCA TGGTGCGCCT GGTGGTGTTC TACCTGGCCA CGATCGCGCT GATGCTGGCC
ATCGTGCCGT GGTCGGCCGC CGGCAAGGAC GGCAGCCCCT TCGTGAAGGT GATGGAGATC
ATCGGCCTGC CCGGCGCGGC CAGCGTGGTC AATTTCGTGG TGCTGGTGGC CGCCCTGTCG
GCCATGAACA GCCAGCTGTA CATCACCACC CGCATGATGT TCAGCCTCTC GCGCGCCGGC
CATGCCCCCG CCGTGCTGGG CCGCGTGAAT TCGCGCGGCG TGCCGCTGCC GGCGCTGCTG
CTGTCCTGCC TGGGCATTGC CGTGGCCACG CTGTTCAACA TCGTCAACCC AGAGCAGTCC
TTCATGCTGA TGATGGCCGT GGCCATGTTC GGCGCCATGT TCACGTGGTT CATGATTTTC
GTGACCCACC TGTTCTTCCG CATCCACTGG GTGCGCCAGG GCAACAAGCC GCTGGCCTTC
CGCATGTGGG GCTTTCCGGT GCTGACGCTT CTGGGCGCGG CTTTGATGCT GGCCGCCCTG
GTGTCCACGC TGTTCACCGA CGTGTTCCGC CTGACCGTGC TCACCGGCCT GCCCTTCCTG
CTGCTGCTGG GCGCCATCTA CGCCATCTGG TACCGCAAGC CGGCCGGCCA GCCCGCCCCT
CAGACCCAAA CCTCAACCCA AGCCCAAGCG CAAGCCCAGG TTCCCGCCCG GTGA
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| Protein sequence | MPAFEDIVQR EAGLQQQLSA GQMTMIAIGG AVGTGLFLGS GFAIGFAGPS VLISYAIGAV
ISLLLMGCLA EMTVAHPTSG SFGAYAEHYI APWAGFVVRY AYWACVVLAV GTEVTAVGLY
MGYWFPEVPR WAWVVIFSGA LIGVNMMSVK AFGAVEYSFS MIKIIAIVAF IVVGAWVVFG
TRPAGVGFAN YVNNGGFFPN GLWGTWVGVI IAIFSYLSIE MIAVAAGEAK DPQRAVTSAF
RSTMVRLVVF YLATIALMLA IVPWSAAGKD GSPFVKVMEI IGLPGAASVV NFVVLVAALS
AMNSQLYITT RMMFSLSRAG HAPAVLGRVN SRGVPLPALL LSCLGIAVAT LFNIVNPEQS
FMLMMAVAMF GAMFTWFMIF VTHLFFRIHW VRQGNKPLAF RMWGFPVLTL LGAALMLAAL
VSTLFTDVFR LTVLTGLPFL LLLGAIYAIW YRKPAGQPAP QTQTSTQAQA QAQVPAR
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