Gene Daci_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2149 
Symbol 
ID5747711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2361009 
End bp2362508 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content72% 
IMG OID641297232 
ProductL-aspartate oxidase 
Protein accessionYP_001563174 
Protein GI160897592 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0029] Aspartate oxidase 
TIGRFAM ID[TIGR00551] L-aspartate oxidase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGC CTTGCACAGA CGTACTCATC ATCGGCGCCG GCCTGGCCGG CATGGCCGCC 
GCCCTGTCGC TGCCGCCGCA TCTGCGCGTG GCCCTGCTCA GCAAGGGCGC GGCCGAGGAA
TGCGCCAGCG CCTGGGCCCA GGGCGGCATT GCCGCCGTGC TGGATGCACA GGACAGCATC
GACGAACACG CGGCAGACAC CCTGGTCGCG GGCGCAGGCC AGTGCGATGC GCAGGCCGTG
CGCGCCATCC TTGCACAGGC GCCTGCCGCC ATCGATTGGC TGGTGGCCCA CGGCGTGCCT
TTCACGCGTG ACGACACCGG TGGCCTGCAC CTCACGCGCG AGGGCGGCCA CGGCCGCCGC
CGCATCGTGC ATGCCGCCGA CTGCACCGGC CAGGCCGTGC ACGCCGCCCT GCTGCGCGCC
TGCCGGGAGC GCGCGAACAT CGATCTGCAT GAGCACACCA GCGCGCTGGA CCTGCTGACC
GTAGGACAGC CTGCGCACTG CACAGGCGCG CTGGTGCGCC TGCCCGATGG CCGCCAGCAG
CGCTGGCATG CCGCGCATAC CGTGCTGGCC ACGGGCGGGC TGGGGCAGGT CTATCCCGCC
ACCACCAACC CGGCCACCGC CACGGGCGAC GGCGTGGCCA TGGCCTGGCG CGCAGGCTGC
CGCGTGGGCG ACCTGGAGTT CATGCAGTTC CATCCCACGG CGCTGCAGGT GGATGGACGC
GCGGCGGGCC TGGTCTCGGA AGCCCTGCGC GGCGAAGGCG CCCTGCTGCG CCTGCCGGAC
GGCACGCGCT TCATGCCTGC CCATGACGAG CGGGCCGAAC TGGCGCCGCG CGACATCGTG
GCACGCGCCA TCCGGCACGA GATGGACCGC CATGGCCTGG CCTTCGTGCA CCTGGATATC
ACCCACCGGC CACGTGCCTG GCTGCAGTCG CATTTCCCGG GCGTGATGGC CCTGTGCGCC
AGCCATGGCA TCGACATTGC CACGCAGCCG ATTCCCGTGG CCCCATGCGC CCACTACGCC
TGCGGCGGCG TGCTGGCCGA TATCGACGGG CGCACGGATG TCGATGGCCT GCGCGCCATT
GGCGAGGTGG CGCGCACCGG CCTGCACGGC GCCAACCGGC TGGCCAGCAA TTCGCTGCTC
GAATGCGTGG TGATGGGGCG CGCGGCCGCC CAGGCCATCG CGCAGCAGCC GGCTGCTGTC
CCTGCGCCGG CCCAGCCGAC CGAAACCCTG CAGGCCGGCG CACAGGAGCA GGACACGGCA
GCCATCGCGC AGGAGTTGCG CCAGCTCATG CAGGACTGCG TGGGCATACA GCGCAGCGAC
CAGGGCCTGG CGCAGGCCGT GCAGCGCATT GCGGCATGGC GTGAAAGGCT GGCACCTGCC
GCAGGCCATG CGCTGCGCAA TCAGCTCGAT GTCTGCTGGC TCATGGCCAC GGCTGCCGCC
GCACGGCGCG AGAGCTGCGG TGCGCATGCG CGCACCGATG CGCCGGCGCT GGTCGAATGA
 
Protein sequence
MTQPCTDVLI IGAGLAGMAA ALSLPPHLRV ALLSKGAAEE CASAWAQGGI AAVLDAQDSI 
DEHAADTLVA GAGQCDAQAV RAILAQAPAA IDWLVAHGVP FTRDDTGGLH LTREGGHGRR
RIVHAADCTG QAVHAALLRA CRERANIDLH EHTSALDLLT VGQPAHCTGA LVRLPDGRQQ
RWHAAHTVLA TGGLGQVYPA TTNPATATGD GVAMAWRAGC RVGDLEFMQF HPTALQVDGR
AAGLVSEALR GEGALLRLPD GTRFMPAHDE RAELAPRDIV ARAIRHEMDR HGLAFVHLDI
THRPRAWLQS HFPGVMALCA SHGIDIATQP IPVAPCAHYA CGGVLADIDG RTDVDGLRAI
GEVARTGLHG ANRLASNSLL ECVVMGRAAA QAIAQQPAAV PAPAQPTETL QAGAQEQDTA
AIAQELRQLM QDCVGIQRSD QGLAQAVQRI AAWRERLAPA AGHALRNQLD VCWLMATAAA
ARRESCGAHA RTDAPALVE