| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2117 |
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| Symbol | |
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| ID | 5747679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2323498 |
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| End bp | 2325288 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641297200 |
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| Product | glyoxylate carboligase |
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| Protein accession | YP_001563142 |
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| Protein GI | 160897560 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3960] Glyoxylate carboligase |
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| TIGRFAM ID | [TIGR01504] glyoxylate carboligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0226819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA TGAAAGCAAT CGAAGCCGCA GTCCGCGTGC TGGAAAAAGA AGGCGTGACC
GTCGCATTCG GCGTTCCCGG TGCCGCCATC AACCCGCTGT ACGCAGCGCT CAAGGACCAT
GGCGGCATCG GCCATATCCT GGCGCGCCAC GTCGAAGGCG CAAGCCACAT GGCCGAGGGC
TACACCCGCG CCGTGGCCGG CAACATCGGC GTGTGCATCG GCACCAGCGG CCCGGCCGGC
ACGGACATGA TCACGGGCCT GTACTCGGCC AGCGCGGATT CGATTCCGAT TCTCTGCATC
ACGGGCCAGG CGCCGCGCTC GCGTCTGCAC AAGGAAGATT TCCAGGCCGT GGACATTGCC
TCCATCGCCA AGACCGTGAC CAAGTGGGCC ACCACGGTGC TGGAGCCGGC CCAGGTGCCG
CGCGCCTTCC AGCAGGCCTT CCACCTGATG CGCTCGGGCC GTCCCGGCCC CGTGCTGATC
GACCTGCCCA TCGACGTGCA GCTGGCCGAG ATCGAGTTCG ACATCGACAC CTACGAGCCC
CTGCCGGTCT ACAAGCCGGC TGCCACGCGC AAGCAGGTGG AAAAGGCCAT CGCCATGCTC
AACGAGTCCG AGCGTCCGCT GCTGGTCTCG GGCGGCGGCG TGATCAACGC CGATGCGTCC
GAGCTGCTGG TGGAGTTCGC CGAGCTGCTG GACGTGCCCG TGATTCCCAC CCTGATGGGC
TGGGGCACCA TCCCTGACGA CCACCGCCTG ATGGCCGGCA TGTGCGGCCT GCAGACAAGC
CACCGCTACG GCAATGCCAC CATGCTGGCC TCCGACTTCG TGCTGGGCAT TGGCAACCGC
TGGGCCAACC GCCACACGGG CTCGGTCGAG GTCTACACCA AGGGCCGCAA GTTCGTGCAC
GTGGACATCG AGCCCACGCA GATCGGCCGC GTGTTCGCGC CCGACTACGG CATCGTCTCG
GATGCGGGCG CTGCGCTCAA GCTCTTCGTG GAGGTGGCGC GCGAGTGGAA GGCGGCTGGC
CGCCTGAAGG ACCGCAGCGG CTGGGTGGCC GAATGCCAGG CCCGCAAGAA CAATGTGGAG
TACCTGCGCA AGACCAATTT CGACAACGTG CCCATGAAGC CGCAGCGCGT CTACCAGTGC
ATGAACCGCA GCCTGGACAA GGACACCTGC TACGTCTCCA CCATCGGCCT GTCGCAGATT
GCCGGCGCGC AGTTCCTGCA TGTCTACAAG CCGCGCAACT GGATCAACTG CGGCCAGGCC
GGCCCGCTGG GCTGGACCGT GCCGGCCGCC CTGGGCGTGC GCGTGGCCGA CCCGGCCCGC
AAGATCGTGG CGCTGTCGGG CGACTATGAC TTCCAGTTCA TGATCGAGGA ACTGGCCGTG
GGTGCGCAGT TCAAGCTGCC CTACATCCAT GTGCTGGTCA ACAACAGCTA CCTGGGCCTG
ATCCGCCAGG CGCAGCGCGC CTTCTCCATC GACTACTGCG TGCAACTGGC CTTCGACAAC
ATCAATGTCG ATGACAAGGA AGAGTCCAAG GGCTACGGCG TGGACCACGT CAAGGTGGTC
GAGGGCCTGG GCTGCAAGGC CATCCGCGTG CACCGTCCCG AGGACTTCGC GCCCGCCATG
CAACAGGCCG AGGCCTGGAT GGCAGAGCAC CGCACGCCGG TCGTCGTCGA GGTCATCCTG
GAGCGCGTGA CCAACATCTC CATGGGCGCC GAGATCGACA ACGTGATCGA GTTCGAGGAC
CTGGCCGCAG CGCCTGCCGA CGTGCCCAGC GCGCTTGCAC TGCTGGATTG A
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| Protein sequence | MAKMKAIEAA VRVLEKEGVT VAFGVPGAAI NPLYAALKDH GGIGHILARH VEGASHMAEG
YTRAVAGNIG VCIGTSGPAG TDMITGLYSA SADSIPILCI TGQAPRSRLH KEDFQAVDIA
SIAKTVTKWA TTVLEPAQVP RAFQQAFHLM RSGRPGPVLI DLPIDVQLAE IEFDIDTYEP
LPVYKPAATR KQVEKAIAML NESERPLLVS GGGVINADAS ELLVEFAELL DVPVIPTLMG
WGTIPDDHRL MAGMCGLQTS HRYGNATMLA SDFVLGIGNR WANRHTGSVE VYTKGRKFVH
VDIEPTQIGR VFAPDYGIVS DAGAALKLFV EVAREWKAAG RLKDRSGWVA ECQARKNNVE
YLRKTNFDNV PMKPQRVYQC MNRSLDKDTC YVSTIGLSQI AGAQFLHVYK PRNWINCGQA
GPLGWTVPAA LGVRVADPAR KIVALSGDYD FQFMIEELAV GAQFKLPYIH VLVNNSYLGL
IRQAQRAFSI DYCVQLAFDN INVDDKEESK GYGVDHVKVV EGLGCKAIRV HRPEDFAPAM
QQAEAWMAEH RTPVVVEVIL ERVTNISMGA EIDNVIEFED LAAAPADVPS ALALLD
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