| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2109 |
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| Symbol | |
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| ID | 5747671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2314265 |
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| End bp | 2316040 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641297192 |
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| Product | unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein |
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| Protein accession | YP_001563134 |
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| Protein GI | 160897552 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
[COG3195] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family
[TIGR03164] OHCU decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0454035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTGA CGCTGGAACA ACTCAACGCC GCCGACCTGG CCACCGCCGC CAGTCTGCTG
GACGGCCTCT ACGAACACTC GCCCTGGATT GCCGAGGCCG CGCTGGCCCA GCGCCCCTTC
CGCTCGCTGG CACAGATCAA GTACGCCATG GCCCAGGTGC TGGACAAGGC GCCGGTGCAG
GCCAAGCTCG ACCTGATCCG CGCCCACCCG GAGCTGGCCG GCAAGGCCAT GGAGACCAAC
ACGCTCACGG CCGAATCCAC CAACGAGCAG AACAAGGCCG GCCTGACGCG CTGCACGCCC
GAGGAGCTGG AGCACATCCG CAAGCTCAAC GCCGAATACG GCAAGCGCTT CGGCTTTCCC
TTCATCCTGG CCGTGCGCGG TCCGCGCGGC GCGGGCCTGG CCAAGGCCGA GATCATCGAG
ACCTTCGAGC GCCGCCTGCA CAACCACCCC GACTTCGAGC TGGGCGAGGC GCTACGCAAC
ATCCACCGCA TTGCCGAGAT CCGCCTGAAC GACAAGTTCG GCTACACGCC CGAGCTGGGC
AACGATGTCT GGGACTGGCA GGAAAAGCTG GCCCAGCACA GCGACCCGGG ATATGCCGAA
AAGGGCCAGC TCACCGTCAC CTACCTGACC GATGCCCACC GCGCCTGCGC CCAGCGCATC
AGCCACTGGA TGCGCGACTG CGGCTTCGAC GAGGTCGAGA TCGACGCCGT AGGCAACGTC
GTGGGCCGCT ACAAGGCAGC CACCGACGAT GCCAGGACCC TGCTGACCGG CAGCCACTAC
GACACCGTGC GCAACGGCGG CAAGTACGAC GGCCGCCTGG GCATCTTCGT GCCCATGGCC
TGCGTGCGCG AGCTGCACCG CCAGGGCAAG CGCCTGCCGT TCCACATCGA GGTCGTGGGC
TTTTCCGAAG AAGAAGGCCA GCGCTACAAG GCCACCTTCC TGGGCTCGGG CGCACTGATC
GGCGACTTCA GGCAGGAATG GCTGGAGCAA AAGGATGCCG ACGGCATCAC CCTGCGCGAG
GCCATGCAGC ATGCCGGCCT GTGCATTGAC GACATCCCCA AGCTGCAGCG CGATCCGGCC
CGCTACCTGG GCTTCATCGA AGTGCACATC GAACAGGGCC CGGTGCTCAA CGAACTGGAC
ATCCCGCTGG GCATCGTCAC CTCCATCAAC GGCAGCGCGC GCTACATCTG CGAGATGATC
GGCATGGCCA GCCACGCCGG CACCACGCCC ATGGACCGCC GCCGCGATGC CGCCTGCGGC
GTGGCCGAGT TGGCGCTGTA CATCGAAAAG CGCGCCGCGC GCGACGGCAC CTCGGTGGCC
ACCATGGGCC AGCTCAATGT GCCCAGCGGC TCGGTGAACG TGGTTCCCGG CCGCTGCCAG
TTCAGCCTGG ACCTGCGCGC GCCCACCAAC GAGCAGCGCG ACGCCATGGT GGCCGACATC
CTGGCCGAGA TCGAGGCCAT CGCCCAGCGC CGTGGCCTGC GCTACAGCAC CGAGCTGGCC
ATGAAGGCCG CCGCCGCCCC CAGCGCCCCC GAATGGCAGC AGCGCTGGGA AGCCGCCGTG
GACGCCCTGG GCGTGCCCCT GTACCGCATG CCCAGCGGCG CCGGCCACGA CGCCATGAAG
CTGCACGAAA TCATGCCCCA GGCCATGCTG TTCGTGCGCG GCCTGAACGC CGGCATCAGC
CACAACCCGC TGGAAAGCTC CACCGCCGAC GACATGCAAC TGTCCGTCGA TGCCTTCTCC
CACGTACTGA ACCAGCTGGC CCAAGAGCAG CAATGA
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| Protein sequence | MALTLEQLNA ADLATAASLL DGLYEHSPWI AEAALAQRPF RSLAQIKYAM AQVLDKAPVQ
AKLDLIRAHP ELAGKAMETN TLTAESTNEQ NKAGLTRCTP EELEHIRKLN AEYGKRFGFP
FILAVRGPRG AGLAKAEIIE TFERRLHNHP DFELGEALRN IHRIAEIRLN DKFGYTPELG
NDVWDWQEKL AQHSDPGYAE KGQLTVTYLT DAHRACAQRI SHWMRDCGFD EVEIDAVGNV
VGRYKAATDD ARTLLTGSHY DTVRNGGKYD GRLGIFVPMA CVRELHRQGK RLPFHIEVVG
FSEEEGQRYK ATFLGSGALI GDFRQEWLEQ KDADGITLRE AMQHAGLCID DIPKLQRDPA
RYLGFIEVHI EQGPVLNELD IPLGIVTSIN GSARYICEMI GMASHAGTTP MDRRRDAACG
VAELALYIEK RAARDGTSVA TMGQLNVPSG SVNVVPGRCQ FSLDLRAPTN EQRDAMVADI
LAEIEAIAQR RGLRYSTELA MKAAAAPSAP EWQQRWEAAV DALGVPLYRM PSGAGHDAMK
LHEIMPQAML FVRGLNAGIS HNPLESSTAD DMQLSVDAFS HVLNQLAQEQ Q
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