| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2108 |
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| Symbol | |
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| ID | 5747670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2312976 |
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| End bp | 2314268 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641297191 |
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| Product | peptidase dimerisation domain-containing protein |
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| Protein accession | YP_001563133 |
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| Protein GI | 160897551 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0921136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA TGAACCAAGA CAAGCAAGCC ACCTACGCCG CCCTGGACGC CTGGATCGAC
CAGCATTTCG ATGAAGAGGT GCAATTCCTG CAGGCCCTGG TCCAGGTTCC GACCGACACC
CCGCCCGGCA ACAACGCCCC CCATGCCGAG CGCACGGCCG AGCTGCTCAA GACCCTGGGC
TACGAGGCCG AGAAGCACAC CGTGCCCGAG GCCGACGTCA AGGCCTACGG CATGGAGTCC
ATCACCAACC TGATCGTGCG CCGCCCCTAC GGCAGCGCAG GTGACGCCGG CGGCGGCCTG
ACCATCGCGC TGAACGCCCA CGGCGACGTG GTGCCGCCCG GTGAAGGCTG GACCCAGGAC
CCCTATGGCG CCGCCATCGA GGACGGCAAG CTCTACGGCC GCGCCGCCGC CGTGAGCAAG
AGCGACTTCG CCACCTTCAC CTACGCCGTG CGTGCGCTCG AAGCCGTGGC CCGGCCCTCC
AAGGGCGCGG TGGAACTGCA CTTCACCTAT GACGAGGAAT TCGGCGGCAT CCTGGGCCCC
GGCTGGCTGC TGGCCAACAA CCTCACCCAA CCCGACCTGA TGGTCGCGGC CGGCTTCAGC
TACGAAGTCG TCACCGCCCA CAACGGCTGC CTGCAGATGG AAGTGACCGT GCAGGGCAAG
ATGGCCCACG CCGCCGTGCC CCACACGGGC GTGGACGCGC TGCAGGCCGC CGTGGTGCTG
ATGAATGCGC TGTACGCCGA GAACACCAAG TACCAGCAGG TGACCTCCAA GGTGCCGGGC
ATCAAGCACC CCTACCTGAA CATCGGCCGC ATCGAAGGCG GCACCAACAC CAACGTGGTG
CCCGGCAAGG TCGTGCTCAA GATCGACCGC CGCATGATCC CCGAGGAGAA CCCGGCCGAG
GTCGAGGCCA GCATCCGCGC CGTCATCGCC CAGGCCATTG CCGACTTCAA CGCCAAGGGC
GGCTACACGG GCGAGGATGC CGTGCGCGTG GACATCAAGC GCCTGCTGCT GGCCAATGCC
ATGACGCCGC TGGCGGGCAA CAAGCCCCTG GTGGACGCCA TCCAGGCCCA TGGCGAAGCC
GTGTTCGGCG AAAAGCCCCC GGCCGTGGGC ACGCCGCTGT ACACCGACGT GCGCCTGTAC
GTGGAGCGCG GCATTCCCGG CGTGATCTAC GGCGCCGGCC CGCGCACCGT GCTGGAATCC
CACGCCAAGC GCGCCGACGA GCGCCTGGTG CTGGAGGACC TGCGCCGCGC CACCAAGGTC
ATCGCGCGCA TGCTGTGCGA CCTCACGGCC TGA
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| Protein sequence | MTDMNQDKQA TYAALDAWID QHFDEEVQFL QALVQVPTDT PPGNNAPHAE RTAELLKTLG
YEAEKHTVPE ADVKAYGMES ITNLIVRRPY GSAGDAGGGL TIALNAHGDV VPPGEGWTQD
PYGAAIEDGK LYGRAAAVSK SDFATFTYAV RALEAVARPS KGAVELHFTY DEEFGGILGP
GWLLANNLTQ PDLMVAAGFS YEVVTAHNGC LQMEVTVQGK MAHAAVPHTG VDALQAAVVL
MNALYAENTK YQQVTSKVPG IKHPYLNIGR IEGGTNTNVV PGKVVLKIDR RMIPEENPAE
VEASIRAVIA QAIADFNAKG GYTGEDAVRV DIKRLLLANA MTPLAGNKPL VDAIQAHGEA
VFGEKPPAVG TPLYTDVRLY VERGIPGVIY GAGPRTVLES HAKRADERLV LEDLRRATKV
IARMLCDLTA
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