Gene Daci_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2103 
Symbol 
ID5747664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2305753 
End bp2306859 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content57% 
IMG OID641297185 
Productreplication initiation factor 
Protein accessionYP_001563128 
Protein GI160897546 
COG category[L] Replication, recombination and repair 
COG ID[COG2946] Putative phage replication protein RstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.608188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0902845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACG AAGAAAAACT CGTCATCGAG GGCGGTCGCG TCAAGCTGCT GTGCGAACGT 
CGCCAGCTTG AGGCCAAGTC TCAAAACGGC ATCATTGTTG ACTACCTGCG CTTCACCGTT
AAGCGCGATT TGATCCCGGA CACGAAACGT ATCCCGCGCG AGTCTGAGGA CCGTGACCTA
GTCAAGTACT ACGCGCTGAT ATTCGCAAAC CTGCTCGGCT TCGAGCTGGG CATTGAGCGT
CCTGGTCGTG ACTACTACGA GCACACGTAT ACGGTCGACA ACGAAAACGG TCACGAAGTG
GCCAGCGTCA GCGCAGGCGG CGAAAGCCAG CGCGGAACCA TCTGTTTCAC GCTCAAGGGC
GAAGGCTGTA CGCATGCCCG TCCAGGCTGG GAAAAGCGCG TCCACGACTA CTTTTCGGAC
ATGGTGCCGA CCATCACCCG CATCGATGCG GCTAAGGATT TTTTCGCTGG CGAAGTGACC
ATCGAAGAGG TTGTAGGCCT CTACAAAGAT CACAAATTCA GCTACCGCAA GCGCATGCCC
AAGTACACGA CGCATGGGGC GTGGGAGCTC GGTAGCACCG TCGATGACAT TCCGCTGCAC
GGTCACAGCC GCACATTCCA AGTGGGAAAA CGCGAGTCCG GAAAGCTTGC CCGCTTTTAC
GAAAAAGATC ACCAGTACGG CAATTTCGCG GGGTCCTGGC TGCGCGCTGA ACTGGAGCTT
CGCAATGCTG GCCGGGTCAT CCCATGGGAT GCTGTCATCA ACGCGGCAGA GTACTACGCA
GGGGGCTATG AGGCTCTCAA ATTGCTCTGT GATCGGGATG CCGGAACGGT CATTCCAACA
AGCGTTAAGG CGGGTGAAGC ATCAGCGGAC AAGTTTGTCC GTTGGATCGT TCGCACCGTC
GCGCCAAGCC TTGCGCAGAT CACAAAAATC ATGCCGGATG AGGACTGGCT GCACGGAATC
GTGCTTGATC AGGCTCACCG GAAAGTCCCT CGCAGCTTGC GCGGCCTGAG CCTGCAATCC
ATGTCGCACG GGGTCACTGA AGCTCTAAGC AAATTCACCC AATTCATGAA TCCCGCCGCA
CCGGCCGGCG CGGGTCTTTT GCAATAA
 
Protein sequence
MNNEEKLVIE GGRVKLLCER RQLEAKSQNG IIVDYLRFTV KRDLIPDTKR IPRESEDRDL 
VKYYALIFAN LLGFELGIER PGRDYYEHTY TVDNENGHEV ASVSAGGESQ RGTICFTLKG
EGCTHARPGW EKRVHDYFSD MVPTITRIDA AKDFFAGEVT IEEVVGLYKD HKFSYRKRMP
KYTTHGAWEL GSTVDDIPLH GHSRTFQVGK RESGKLARFY EKDHQYGNFA GSWLRAELEL
RNAGRVIPWD AVINAAEYYA GGYEALKLLC DRDAGTVIPT SVKAGEASAD KFVRWIVRTV
APSLAQITKI MPDEDWLHGI VLDQAHRKVP RSLRGLSLQS MSHGVTEALS KFTQFMNPAA
PAGAGLLQ