| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2077 |
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| Symbol | |
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| ID | 5747638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2270865 |
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| End bp | 2272607 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641297159 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001563102 |
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| Protein GI | 160897520 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.668276 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGGCC GCCCGACCTC CCCTTCCATG GGCTGGCACG CCCGCTGCCA CGCCCGGCTG
CGCCAGCTGC TGGCCGCTGC CTGCTGCCTG TCCGCACTGC AGGCGCTGCA GGCCGCTGCC
GCGCCCGTGG CTGCGGCGGA CAGGGACCTT GATACGGACA TCGGCATGGT TGCAGCAGCC
GCAGCCGCAG CCGCACCCGC ATCCACATCC GCAAACACGG CCGCAGCCGC ACCGGACCCC
GTGGTCCTGC GCCTGGCCCA GCACCTCACG CCCGGCACCC TGGCCAGCGA CGGCGGGCAG
CGCCGCCTGC TCGATGCGCT CTACGCCCTG ATCGACGAAT ACCCCGACGT GCGCAAGGCG
CGCGCCGCGC TGGAATCGGC CGGGCATGAC GTGAACACCG CGCGCGGCGC GCGCTGGCCC
ACCTTCAAGG TCGGCACCAA CACGGGCGAT GCCCAGCTGC GCCGGGGCCG CGAGTCCTAC
ACCGCCGTCA ACGCCGAAGT GCGCATGGCC CTGCTGGACG GCGGCGCCAT CGGCGCGGGC
ATACGCTCGG CCGAATCGCA GGAGGCGGCC CAGGGCAGCG TGCTCTACGG CACGCGCCAG
AACGTGCTGC TGGAGGCGCT GACCGCCCTG CTGGAGCTGC ACCGCTTCGA GGACAAGGCG
CGCGTGGCGG CCGAGTCGGC GCGCATCATC GGCCAGCTCG CGCGCATCGA GGAGCGCCGC
GCCGAACTGG GCGCCGTGGG CCGCAACGAC CTGCGCCAGG CCGCCTCGCG CCAGGCCGGC
GCCCTGGCCC AGCAGCACGC GCTGGAGTCG CAGCGCATGG ATGCGCAGGC CCGCTTCACG
CGCTACTTCG GCTTCACGCC CCAGCCAGGC TGGCTGCCCC AGCTCAACGT GCCCGTGCAA
TGGATGCCGG CCAACGAGGA CTCGGCCCTG CAGGCCTCCG AAGCCGTCAG CCCCGAGCTG
CAGGAGATGG AGCAGCAGAT CGAGAAGGCC CGCGCCGAAG TGGACCGCAG CAAGTCCCAG
CGCTTTCCCA CGCTGGCCGC CGTGGTGGCC CACACGCGCG ACCCCAGCGG CGTGCTCTAT
GCCGAGGGCA CGCGCTACGG CGTGGAGCTG AGCTGGAACT TCGGCAACGG CTTCGAGCTG
CGCGACCGCA TCCTCAAGGC CATCAACGAA CTGCAGGCCC AGGAAGCGCA GCAGGAAACC
GTGCGCCGCC AGGTGCGCGA AACCGCCTCC GCCGCCTGGG GCCGCACCCA GTCCGGCCGC
CAGCGCGAAA GCCAGCTGGC CGACGCCGTG CGCGAGGCGC GCGCCGCCTT CGAGGGGCGC
CGCCGCCTGC TCGAAGTCGG GCGCGGCAGC CTGGCCCAGG TGCTGGACGC CCAGCTGGAC
ATGCAGCGCC TGCTGCTGGA CGAGGCCGAC GCCATCTACG ACCAGCGCAT CAACGAACTG
CGCCTGGCAC GCACCACCGG CCGCCTCCTG CCCCAGGACC CGCCCGACCA TTGGCTGAAC
GCGCTGTTCA CCCCGCAAAA ACCGATTCCG GCAGGCGGTG GTGCGCCAGG CACTGCCCCC
ATGGACGAGC CCGGGAACGC GCCCGGCCCT GCGCCCTCGC GCAGCCGCCC CGAACCCCAG
GACGCTGCCG TGGCCACCCT GTCCGCCAGC GCCATGCCCC AACGAATACA GCTGCGCCTT
GAGCAGCAGT TGCGCCCCGT TTCAGACGCT TTTCCAACCA CCGCCTCGCG ACAGCAGTGG
TGA
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| Protein sequence | MPGRPTSPSM GWHARCHARL RQLLAAACCL SALQALQAAA APVAAADRDL DTDIGMVAAA
AAAAAPASTS ANTAAAAPDP VVLRLAQHLT PGTLASDGGQ RRLLDALYAL IDEYPDVRKA
RAALESAGHD VNTARGARWP TFKVGTNTGD AQLRRGRESY TAVNAEVRMA LLDGGAIGAG
IRSAESQEAA QGSVLYGTRQ NVLLEALTAL LELHRFEDKA RVAAESARII GQLARIEERR
AELGAVGRND LRQAASRQAG ALAQQHALES QRMDAQARFT RYFGFTPQPG WLPQLNVPVQ
WMPANEDSAL QASEAVSPEL QEMEQQIEKA RAEVDRSKSQ RFPTLAAVVA HTRDPSGVLY
AEGTRYGVEL SWNFGNGFEL RDRILKAINE LQAQEAQQET VRRQVRETAS AAWGRTQSGR
QRESQLADAV REARAAFEGR RRLLEVGRGS LAQVLDAQLD MQRLLLDEAD AIYDQRINEL
RLARTTGRLL PQDPPDHWLN ALFTPQKPIP AGGGAPGTAP MDEPGNAPGP APSRSRPEPQ
DAAVATLSAS AMPQRIQLRL EQQLRPVSDA FPTTASRQQW
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