Gene Daci_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2061 
Symbol 
ID5747622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2254495 
End bp2255751 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content68% 
IMG OID641297143 
Productglycosyl transferase group 1 
Protein accessionYP_001563086 
Protein GI160897504 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGACA AGCCGGTCAT CATCTTCGTC AGCGCCGTCT ACCCCAGCCA GTACAGCCTG 
CTGTGCAGCC ACCTTCGCGC CAGCGGCGCG GCCGACAGCT GGTTCATGAC CATGCCCGGC
CATGCCGAGA ACTACGCCAG CCAGTGCGAC CACCTGCTGT CGTTCCGGCC CGATGGCGAC
ATCGTCGGCC CGCAAAGCTA CTACTACTCC AGCAAGGTGG AGCGCTCGGC ACGCATAGGC
CGCGGCCTGC TGCAGGGCCT GCAGGCCTTC GAGAAGGAAA AGGGAAAACG CATCGACGTG
GTGGTCGCCC ACTCGCTGTG GGCCGCGCCC AACCTGCTGT ACGGCGAGAT CGATGCGGCC
ATCGTCAGCT ACATCGAGTT CCCCAGCTAC CGCGTGCACG GCAACGAGCC CGACTACCCG
CCCGACCTGT CCCAGCGCCT GGCCGACCGC AACATGGAAA TGCTGCACTA CCACCAGGTG
CTGTGCAGCG ACCTGACCAT CGCGCCCAGC GCCCATGCGC GCTCGCTGTT CCCGCCGCTG
CTGCAGGAGC GCGTGGCCGT GCAGTTCGAG GGCTTCGACA TCCAGGCGCC CGACGAGCAG
GCCGAGCCGC CGCCGCGCCA GGACACGCGC TTCACCGTGG CCTTCTCATC GCGCGACCTG
TCCAGCTCCA AGGGCTTCGA GACCTTCATG CGCCTGGTCG ACCGACTGGT GCGCGAGGGC
GACGGCCAGC AGATGCGCTT CATCGCCCTG GGCGACCCCA CGGCCGTGAC CTACGGTTAC
GAACAGCAAT GGGTGGAGCG CCGCTACCAG GGCAAGGTGG CCAGTTTCCG CGACCATCTT
CTGCAGATCC ACCCGGCCGC CCAGGTGGTG GAGTTCCCGG GCAAGCTGCC GTATGACGAG
TTCGCGCGCA CGCTGGCCTC GGTGGACCTG TTCCTCTATC CGCTGCGCTA CGGCGTGGCC
AACTGGGGAT TGATGGAGAT CCTGGCGCGC GGCGGCTGCG TGATCGGATC GAACTGGGGC
TTTGTGCCGG AGCTGGTGCA AAACGATGTC AACGGCCTGC TGCTGCCCGA CAGCGACGAC
GCCTGGATAG GCGCCATCCG CCAGCTGCGC GACGACCCGG CCCGGCGCCA GCGCTACGGC
CGGGCCGCGC GCGAGACGGG CAAGCGCTTT CACATCTCCA ACGTGGCCCC GCGCTTCATG
GACCTGTTCC GCCTGGCCAT GGCGCGGCGC AAGGCCGCCC CGCTGATGCT GGAGTGA
 
Protein sequence
MQDKPVIIFV SAVYPSQYSL LCSHLRASGA ADSWFMTMPG HAENYASQCD HLLSFRPDGD 
IVGPQSYYYS SKVERSARIG RGLLQGLQAF EKEKGKRIDV VVAHSLWAAP NLLYGEIDAA
IVSYIEFPSY RVHGNEPDYP PDLSQRLADR NMEMLHYHQV LCSDLTIAPS AHARSLFPPL
LQERVAVQFE GFDIQAPDEQ AEPPPRQDTR FTVAFSSRDL SSSKGFETFM RLVDRLVREG
DGQQMRFIAL GDPTAVTYGY EQQWVERRYQ GKVASFRDHL LQIHPAAQVV EFPGKLPYDE
FARTLASVDL FLYPLRYGVA NWGLMEILAR GGCVIGSNWG FVPELVQNDV NGLLLPDSDD
AWIGAIRQLR DDPARRQRYG RAARETGKRF HISNVAPRFM DLFRLAMARR KAAPLMLE