Gene Daci_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2042 
Symbol 
ID5747603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2236412 
End bp2236867 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content70% 
IMG OID641297124 
Productaromatic catabolism protein-like protein 
Protein accessionYP_001563067 
Protein GI160897485 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.689399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC CGACCACGCA CCCCACCCCA TCCACCCAGG CGCTGCAGAA CGCTGTGCTG 
GCCATGCCCA TGGCGCGTAC CCTGGGCCTG CGCTTTGTAC GGGCCGAGCC CGGCGCCACC
GAGCTGGAGA TGCCCATTGC CGATGCCCTG TGCTTTCAGC CGGGCCAGTT GCAGGCCACG
GCGATCTTTG CGCTGGGCGA CTTTGCGGCG GTGTCGGCCG CAGGTTCGCT GCTGCCTGCT
GGCTGGGCCA ATGCCACGGT GGACGGCAGC GTGAAGCTCT TCGCGCCCGC ACGCGGCACC
CACCTGCGGG CGCGCGGCCG CGTGGTGGAT GCCGGCCGCG TGCTCAGCAT CTGCGCAGCG
GACCTGTACG CGGTGGCCGA GGATGGTCAT GAAACGCATT GCGCCACCTG GCTGGGCACG
GCGCGCAATC TGGAGCCCAG GCCAGCGTGG GCCTGA
 
Protein sequence
MTEPTTHPTP STQALQNAVL AMPMARTLGL RFVRAEPGAT ELEMPIADAL CFQPGQLQAT 
AIFALGDFAA VSAAGSLLPA GWANATVDGS VKLFAPARGT HLRARGRVVD AGRVLSICAA
DLYAVAEDGH ETHCATWLGT ARNLEPRPAW A