Gene Daci_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2038 
Symbol 
ID5747599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2230198 
End bp2230941 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID641297120 
ProductGntR family transcriptional regulator 
Protein accessionYP_001563063 
Protein GI160897481 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.335666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCCA ACTCCACCGC GTCGGCCCCT CAACAAGGCC GGGACAAGCT GCACCTGCAG 
CTGGCGCGGC TGTTCCGCAG CAAGGTGTCC ACGGGCGCCT GGCCCGTAGG CAGCGCCATT
CCCACGGTGC AGGAGCTGGA GGCGCTGCAT GGCGTGTCGC GCACCACGGT GCGCATGGCA
CTGGGTGCCC TGGTGGCAGA GGGCCTGCTG CTCACGCGCA AGCGCGGCGG CACGCGGGTG
ATCGCGGCGC CCTACAAGCC GCCGTCCTTC CTGCTGCCCA CCAGCTGGAA GGAGCTGGTG
GCCTTTGGCG CCCACATCGG CCAGATCACC CTGCACACCG GGCGCGACTG CCTGCCGCCA
ATTCCCGAAG GCTTCCCCGA CGTGGGCCGC ATGGCCCCCG CCTACGTGCA CCTGCTGCGC
GTGTACGACC ATGACGCGGC GCGGTTCTGC CTGTCGCAGC TGTACCTGGA GCAGGAACTG
TTCCCCGAGA TCGAGGCCCA GCTGGAGCGC AGCTCCCTGG CCGTGGCCCT GAGCAGCGAC
CCCTCGCGCA TTGCCGTGGC GCGCCAGCAC CTGAGCGTGG CGCCGGCCGA CGAACTGGCC
GCCGAGCACC TGGGCGTGGC CCTGGGCACG CCGTTGATGC AGGCGCTGCG CTGGGCCTGC
AACGCCGACG GGCTGCTGAT CTACTGGGCA CGGGTCCGCT TTCTCAGCGA GTACGTGCAT
ATGGAAATGG ATCTCCTGAA ATGA
 
Protein sequence
MPSNSTASAP QQGRDKLHLQ LARLFRSKVS TGAWPVGSAI PTVQELEALH GVSRTTVRMA 
LGALVAEGLL LTRKRGGTRV IAAPYKPPSF LLPTSWKELV AFGAHIGQIT LHTGRDCLPP
IPEGFPDVGR MAPAYVHLLR VYDHDAARFC LSQLYLEQEL FPEIEAQLER SSLAVALSSD
PSRIAVARQH LSVAPADELA AEHLGVALGT PLMQALRWAC NADGLLIYWA RVRFLSEYVH
MEMDLLK