Gene Daci_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2035 
Symbol 
ID5747596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2226240 
End bp2227841 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content71% 
IMG OID641297117 
Productsporulation domain-containing protein 
Protein accessionYP_001563060 
Protein GI160897478 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.524131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCC CATCGGAAGA CGCCATCTCA GCACCTCCCG CCACCATCGA CTTCGGAAGG 
CAGGCGGCCC CTGCCCGGCA GGAGCCCGCC TTTGCCGAGC CCGGCAGTGC CAGCAGGCCC
GACACGGCCG ACTCTCCCAA GAGCCCCAGC AAACTGCCGC CCTCGATAGC CAGCGCCTTC
GCCGCCGCAG CCTATGCGCT GCAGCACGGC GATGACGCCG CTGCCCCCAA CGAGCGGGCA
GGCGCCGGCG CACATTCCGG CGTCACCAGC TTCACGGGCG GACAGGGCAC CGGCCTGATG
CCGGGCCTGT ACGCCAGCCT GATTGGCGAG CCCTCGCGCG ACTACTACCT GCGCCTGTTC
GAGCGCTTCG ACGCGCTGGG CAAGCCCTTG CCTACATGGA ACCTGGCCGC AGGCCTGTTC
ACCCTGCCCT GGTGCGGGCT GCGCGGGCTG TGGCAAGAGG GCGGCCTCTA TGCGCTGGCC
GCCGGCGGCA CGGGCCTGGT CTGGGGCCTG CTGCTGCGCC CCGCGCTGGG CCTGCCCCCG
GCGATTGCCC ACGGCATCGA TGCCACGCTG ATCCTGCTGG CCATTGCCAT TCCCGGCCTG
GGCGCCAATG CCCTGTACTG GCACCATGTG CGCCGCCACA CGCTGCAAGC CATTGGCGAG
GCCCCCAACA TGGCCGCAGC GCACGAACGC CTGGCCCGCC GCGCGGCCAC GCCCCTGCGC
AAGCGGCTGG CCGTGGCGGC CGGTGCGGTG CTTGCCGCCG CTGCCGGTGC AGGCATCTGG
GCGCTGTCGG GCATGCCACA TTTCATGGCG GCACAGACCG AGGTGATTCC GTCCGAGGTG
ATCCCGTCCG AATCCATACC GGCCGCTGCA CCAGTTGCGC CAGCTGCACC AGCCGTGGCG
CCAACGCCCG CCGCAGCCGT ACCTGCCGTT GAAACGCCAA GGACGGAACC GGCGCCCACA
CCCGCCCCCA CTCCCGCCCC CACGCCCCAG CCGCAAGAGC CGGTTGCCCA GACCGAGGCG
CGCCCTGATC CGCAAGCGCC CTTGCCCGCT GCCGGCAGCA CTGTCTCCGG CACGGTCGAA
CCCATGCCCG TAGTGGCAGC GGCCGGCGCT GCGGGTGCCG TCGCTGCCAC TGCAGCGGCA
GCCATTCCCG TCAAGGCCGC GTTGGTGCCA GCCAAAGCGC CTGCACCTGC ACCTGCGCCA
GCGTCCGTGC ACGCAGCCAC GCCAGCGCCC GCCAAGCCCT CCAAGGTGGC GGCTGAAACC
AAACCAGCCA AGCCCGCCAA GCCCGCCGAA CCCGTCGCAA AGGCCCCGGC ACCTGCCAAG
GCCGCCTCGG CGGCTCTGGA GCCGGGCAAC TACTACATCA ACATCGGCGT GTTCTCTGAA
GCTGGCAATG CCGGGCGCGT GGTGGAGCGG CTGGAGAAAG CCAAGCTGCC CACGCTCAGC
CAGACCCTGC ACAGCAACAA GGGCGAGGTC GTGCGCGTGC GCTCGGGCCC CTTTGCCAAG
CAACGCAGCG CCGATCAGGC GGCCGCCAAG ATACGCGCCA TGGGCATGGA GGCCACGGTC
TTCCACCACG CCCCTGCGGA AGGCCGCAGC GCGCGACGCT GA
 
Protein sequence
MPAPSEDAIS APPATIDFGR QAAPARQEPA FAEPGSASRP DTADSPKSPS KLPPSIASAF 
AAAAYALQHG DDAAAPNERA GAGAHSGVTS FTGGQGTGLM PGLYASLIGE PSRDYYLRLF
ERFDALGKPL PTWNLAAGLF TLPWCGLRGL WQEGGLYALA AGGTGLVWGL LLRPALGLPP
AIAHGIDATL ILLAIAIPGL GANALYWHHV RRHTLQAIGE APNMAAAHER LARRAATPLR
KRLAVAAGAV LAAAAGAGIW ALSGMPHFMA AQTEVIPSEV IPSESIPAAA PVAPAAPAVA
PTPAAAVPAV ETPRTEPAPT PAPTPAPTPQ PQEPVAQTEA RPDPQAPLPA AGSTVSGTVE
PMPVVAAAGA AGAVAATAAA AIPVKAALVP AKAPAPAPAP ASVHAATPAP AKPSKVAAET
KPAKPAKPAE PVAKAPAPAK AASAALEPGN YYINIGVFSE AGNAGRVVER LEKAKLPTLS
QTLHSNKGEV VRVRSGPFAK QRSADQAAAK IRAMGMEATV FHHAPAEGRS ARR