Gene Daci_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2008 
Symbol 
ID5747567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2194597 
End bp2195565 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID641297088 
Producthypothetical protein 
Protein accessionYP_001563033 
Protein GI160897451 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.400318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGCA TGCCCCCCTG GACGGCCATC GCCCTGGCCG CCTCGCTGCT GGCCGGTGGC 
GCCCACGCCT TCGGCGACAA GCCGGTCCGG CTCATCGTGC CGGCGCCGCC CGGCGGCACC
ATCGATGTGT TCGCGCGCAT CATCAGCGAC CAGCTGGCGC AGGAGATACG CCAGCCCGTC
ATCGTCGAGA ACCGGCCCGG TGCCGGTGGC GCCATCGCCG TCAAGCACAT GCTGTCCCAG
CCGGCCGACG GCAGCACGCT GCTGGTGACG GTGACCAACA TCCTCACCGA GGTGCCCCAT
GTGCTCAAGG TCGGGTTCGA CCCCCTGAAG GACGTGCGGC CCGTGGCGCA GATGGCGCGC
TCGGTGATGC TGTTCATCGC CTCGCCGCAG TTTCCAGCGC GCGACGGGGC CGAGGCCATC
GCCTACGTGA AGGCCCACCC GGGCACGCTG TCGTTCGCCT CGTACAGCCA GGGCACGGCC
TCGCAGTACG CAGGCGCCAT CCTCAACAGA AGGGCCCACC TGGACATGGA GCATGTGGCC
TTCCCGGGCT CGGCACCCGC GCTGGCCCAG GTCATGGGCA ACCAGATCCC GCTCATGTTC
GACGGATCGG TCACCTCCAA GCCGCTGATC GCGGGCGGCA AGGTCAGGCT GCTGGCCGTG
GCCTACAAGA GCCGGCTGCC CGACTACCCG CAGGTGCCCA CGCTGGCCGA GCTGGGCTAT
CCCGAGGTGG ATTTCAGCAA CTGGAGCGGC GTGTTCGCCT CGGCGCAGAC GCCGCGCCCG
CTGCTGGAGA AGATCCACGG CGCGCTGGCC CGGGTCAACG CCCGCAAGGC CGTGCGCGAA
CGCTATGCGG GCACGGGCTT CGAGCCCGTA GAAGGCGATC GCTCGCTGGA GCAGATGTCC
ACCGACCTGC GCACCGAGTT CGACCGCAAT GCCGAGATCG TCCGGAACTT CGACATCCGG
CTCAACTGA
 
Protein sequence
MQRMPPWTAI ALAASLLAGG AHAFGDKPVR LIVPAPPGGT IDVFARIISD QLAQEIRQPV 
IVENRPGAGG AIAVKHMLSQ PADGSTLLVT VTNILTEVPH VLKVGFDPLK DVRPVAQMAR
SVMLFIASPQ FPARDGAEAI AYVKAHPGTL SFASYSQGTA SQYAGAILNR RAHLDMEHVA
FPGSAPALAQ VMGNQIPLMF DGSVTSKPLI AGGKVRLLAV AYKSRLPDYP QVPTLAELGY
PEVDFSNWSG VFASAQTPRP LLEKIHGALA RVNARKAVRE RYAGTGFEPV EGDRSLEQMS
TDLRTEFDRN AEIVRNFDIR LN