Gene Daci_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1984 
Symbol 
ID5747542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2167002 
End bp2168384 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content65% 
IMG OID641297063 
ProductNa+/solute symporter 
Protein accessionYP_001563009 
Protein GI160897427 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CAGTCTTCCT GGGCTTCATC GCACTGTCCC TGTACCTGGC CATCCGCTCG 
CGCACGGGCA AGGGTGCGCA AAGCGTGCAT GACTTCTTCG TCGCCTCGCG CCAGTTCGGC
GCCTTCCTGG TGTTTTTCCT CGCCGCCGGC GAGATCTACA GCATCGGCAC CATGGTCGGC
TTTCCGGGCG GCATCTACGC CAAGGGGCCG ACCTATGGCG TCTGGTTCCT GGGCTACATC
CTGCTGGCCT ATCCGCTGGG CTACTTCCTC GGCCCCATGA TCTGGAAGGC CGGCCTGCGC
CACAACGCCA TCACCCTGCC GGACCTGTTC AAGGGCCACT TCGGCAGCCG CGCGCTGGAG
CTGATCGTGG CCGGCTCGGC CATCCTGTTC CTGCTGCCCT GGGGCCAGCT GCAGTTCACG
GGGCTGGTGG CGGCGCTCAA GGGGCTGGGC TGGAACTTCC AGCCGCTGCA CCTGCTGCTG
ATCTCGGCGG GCCTGGCCTT CACCTACATC GCCATCTCGG GCGTGCGTGC CTCGGCCTAT
ATCGCCATCC TCAAGGACAT CCTCATGGTG GTGGCCATCA TCGCCACGGG CGTGGCCGTG
GGCTGGCATG CCGGGGTGGG CGATGTGTTC GCCGCCGCCA GCGCCAAGGT CAGCAACCAC
ATGACCGATA CGCAGCTGCG CTTTTCCATG AGCACCATGC TGTTCCAGGC GCTGGGCTTT
TACATGATGC CGTTCGCCGT GCAGAACTTC TTCACGGCCA AGAGTTCGCA CACCATTCGC
CGCACGCAGA TCGCCATGCC GCTGTACATG CTGATGTACC CGTTCCTGGT GCTGGCCTCG
TACTACGCCA TCAGCCAGAA CCTGGAACTG GCATCGCCCA ACGAGGCCTT CTTCGCCGCT
GCCGTTCGCC TGCTGCCCGA CTGGCTGCTG GGGCTGGTGG CCGCAGGCGC CGCGCTGTCG
GGCCTGCTGG TGCTGGCGGG CATCTGCCTG GCCATCGGCC CCATCGTGGC GCGCAACCTG
CTGCCCGGCC TGCCCGAGGC CAAGCAAAAG CAGGGCGCCA AGGTGGTGAT CGTCATCTAC
CTGCTGCTGT CCATCGTGAT GACGCTGCTC ACGCCCAACC TGATGCTGAC CCTGATCAAC
ACCACCTACT ACGGCGTGAC GCAGTTCTTC CCGGGAATGA TGGCCATCCT GTTTGGCTGG
CGCATCCGGC CCCTGGCCAT TGCCCTGGGC ATCGTCTGCG GGCAGGCGCT GGCCATCGTG
CTGTACCTGC AGCAACCGGA CTTCGGCGGC ATCAACCTGG GCTTCATCAG CCTGGCGCTG
AACCTGCTGG TCACGGCCAT CGTCCACTGC CTGCCGCGTG CGGCACACGT CAAGACCGCC
TGA
 
Protein sequence
MTTAVFLGFI ALSLYLAIRS RTGKGAQSVH DFFVASRQFG AFLVFFLAAG EIYSIGTMVG 
FPGGIYAKGP TYGVWFLGYI LLAYPLGYFL GPMIWKAGLR HNAITLPDLF KGHFGSRALE
LIVAGSAILF LLPWGQLQFT GLVAALKGLG WNFQPLHLLL ISAGLAFTYI AISGVRASAY
IAILKDILMV VAIIATGVAV GWHAGVGDVF AAASAKVSNH MTDTQLRFSM STMLFQALGF
YMMPFAVQNF FTAKSSHTIR RTQIAMPLYM LMYPFLVLAS YYAISQNLEL ASPNEAFFAA
AVRLLPDWLL GLVAAGAALS GLLVLAGICL AIGPIVARNL LPGLPEAKQK QGAKVVIVIY
LLLSIVMTLL TPNLMLTLIN TTYYGVTQFF PGMMAILFGW RIRPLAIALG IVCGQALAIV
LYLQQPDFGG INLGFISLAL NLLVTAIVHC LPRAAHVKTA