Gene Daci_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1886 
Symbol 
ID5747443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2088190 
End bp2089044 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content71% 
IMG OID641296964 
Productalpha/beta hydrolase fold 
Protein accessionYP_001562911 
Protein GI160897329 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAACC CGCGCCACAG CCTCCTGCAG GCGCTGGACT CCACGGCGCG TCACCATGTG 
CTTGCCGCCA CCTGGGGGGA CGAGGGCGTG GACCTGCACT GGCGTGAATG GGGGCAGGGC
CGCCCCCTGG TGCTGCTGCA CGGCGGCCAC GGGTCGTGGA TGCACTGGGT GCGCAACATC
GAAGCGCTGT CGCGCCAGTT CCGCGTGCTG GTGCCTGATC TGCCGGGCTT CGGTGATTCG
CAGGACTTCG CACTGCCCGC CCATGACCCC GCACGCCTGC CGGCCCTGCT GCAATCGCTG
GAGCAATGTC TGGACCTGCT GGTACCCGAG CAGGGCGTTC TCCTGGCGGG CTTTTCCTTC
GGCGCAGCGA TGGCAGCCCA GCTGGCAGCG CGCGTGCAGC GGGTGGAGCG CCTGGTGCTG
CTGGGCACGG CCGGCCACGG CGGCAGGCGC CGCGAGATGG CCCCGCTGCT GGACTGGCGC
GTGGACGACC TCGCCGCGCG CGAGGCCGCG TGGCGGCAGA ACCTGGCGGC CTTCATGCTG
TCGGGACCGG AGGCCGTGGA TGCGCTGGCC CTGTGCGTGC ATGGTCTGTC CTGCGAAGCC
ACGCGCTTTC GCAGCAAATC CATTTCGCGC GGCAGCGCGC TGCAGGCATT GCTGCAGGAC
TACCGGCGCC CCGTGCTGCT GGTCTGGGGC GAGGCCGACG TCACGGCCGA GCCCATGGAG
GCCGCCGAAT CCCTGGCGCA GGGACGCGCC GAGCGCGACT GGACCATCGT GCCGCGTGCC
GGCCACTGGG TGCAGTACGA ATGCGCACCG GAGGTGAACC TGCTCATGGC CCGCTGGCTG
CAGGCGCAAT CCTAG
 
Protein sequence
MLNPRHSLLQ ALDSTARHHV LAATWGDEGV DLHWREWGQG RPLVLLHGGH GSWMHWVRNI 
EALSRQFRVL VPDLPGFGDS QDFALPAHDP ARLPALLQSL EQCLDLLVPE QGVLLAGFSF
GAAMAAQLAA RVQRVERLVL LGTAGHGGRR REMAPLLDWR VDDLAAREAA WRQNLAAFML
SGPEAVDALA LCVHGLSCEA TRFRSKSISR GSALQALLQD YRRPVLLVWG EADVTAEPME
AAESLAQGRA ERDWTIVPRA GHWVQYECAP EVNLLMARWL QAQS