| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1872 |
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| Symbol | |
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| ID | 5747429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2071333 |
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| End bp | 2072253 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641296950 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001562897 |
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| Protein GI | 160897315 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.634039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATGC ACACGCAGGC CGCCGCGGGC CGATGGCAGA TACCGTCCGG GAACGCCGCG
CGCCTGTCCG CGCTGGTGCG GGCCGCCGTG CAGGCCGTTG TGCTGCCCGC TGTGCTGCCC
GTTGTACAGG CGCTGCTGCT GGCACTGGTG CCGGTCTGGG TGGCGGTGCT GGCCATGGGG
CCTGGCGCAG CACGGGCCGG CGAGGTGCTG GACCGCGTGG CCAGCAGCCA CACTCTGAAG
GTCTGCATCT GGCCCGACTA CTACGGCATC ACCTACCGTG ACGCACGCAC GGGCAGGCTC
ACGGGCATCG ACGCGGAGCT CTCGGCAGAG CTGGCCAAGG ACCTGGGCGC GCGGCTGCAG
CATGTGGACT CGTCCTTCTC GCGGCTGGTG CCCGACCTGC TGGAGTCGCG CTGCGACGTG
GCCATGTTCG CCGTCGGCAT CCTGCCGCAG CGCCAGCAGC AGCTGCGCTT CACCCAGCCC
TACCTGAGCA GCGATATCTA CGGCATCACC ACCAAGAGCA ACCCCGCCGT GCGCAGCTGG
GCCGAAATCG ACCAGCCCGG CGTGCAGGTG GCCGTGCAGC GCGGCACCTT CATGGAGCCG
GTCATGCGCG AGTCGCTCAG GCATGCGCAC CTGGTGCTGG TGGAGCCGCC GCAAACCCGC
GAAAAGGAAC TCATGGCCGG GCGCGTGGAC GTGTTCATGA CCGACTACCC GTACAGCCGC
AAGCTGCTGG ACAGCTCGGA CTGGGTGCAG CTGATCGCGC CGCCCAAGCC CTTCCATGTG
CTGCCCTACG GCTATGCGGC CAGCCCTGCC GACGCGCAGT GGCTGGCGCG CCTGAACCAG
TTCGTCTCGG ACATCAAGCG CGACGGCCGC CTGGCCAGGG CCGCTCGCCA CAACGGCCTG
ACCGCCATCG TCGCGCCCTG A
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| Protein sequence | MTMHTQAAAG RWQIPSGNAA RLSALVRAAV QAVVLPAVLP VVQALLLALV PVWVAVLAMG
PGAARAGEVL DRVASSHTLK VCIWPDYYGI TYRDARTGRL TGIDAELSAE LAKDLGARLQ
HVDSSFSRLV PDLLESRCDV AMFAVGILPQ RQQQLRFTQP YLSSDIYGIT TKSNPAVRSW
AEIDQPGVQV AVQRGTFMEP VMRESLRHAH LVLVEPPQTR EKELMAGRVD VFMTDYPYSR
KLLDSSDWVQ LIAPPKPFHV LPYGYAASPA DAQWLARLNQ FVSDIKRDGR LARAARHNGL
TAIVAP
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