Gene Daci_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1859 
Symbol 
ID5747416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2055103 
End bp2055567 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID641296937 
ProductMarR family transcriptional regulator 
Protein accessionYP_001562884 
Protein GI160897302 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACC CGCCATCAGC CATGACGCCA CAGGATGGCT ATCATTTTTC AGACCAGATC 
GGCCACCTGC TGCGGCGTGT CTATCAGCGC CACACTGCAC TCTTCCAGCA ATACATTCCC
GACTCGCAGC TCACGGCTGC GCAATTCGTG GTGCTGTGCT CCGTGCGCGA CAACAGCGGC
AGCTCGCTGG CCGACATCGT CAAGGCCACC GTGATCGACC AGGCCACCAT CCGCGGCGTG
GTGGACCGGC TCAAGCAGCG CGAACTGGTG CAGGTGGACC ATGACCGCAT CGACCGCCGC
AAGGTCGTCA TCAACCTCAC CGAGGCCGGC CAGGACCTGG TGCGCGACAT GGAGCCCTTC
GCCAAGCAGA TCACCGAAAG CACCTACGGC AAGCTCAATC CGGCCGAGCG CCTGGCGCTG
GATTTTCTGC TCAAGAAGAT GCTGGAAGGT GGCGAGGCGG ATTGA
 
Protein sequence
MNHPPSAMTP QDGYHFSDQI GHLLRRVYQR HTALFQQYIP DSQLTAAQFV VLCSVRDNSG 
SSLADIVKAT VIDQATIRGV VDRLKQRELV QVDHDRIDRR KVVINLTEAG QDLVRDMEPF
AKQITESTYG KLNPAERLAL DFLLKKMLEG GEAD