Gene Daci_1849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1849 
Symbol 
ID5747406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2043439 
End bp2044134 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID641296927 
Productisochorismatase hydrolase 
Protein accessionYP_001562874 
Protein GI160897292 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCG CCACCGCCAC CACCAGCACG CAGAGCGTTC CCACCGAGGG CGTGCAGGGC 
GACATCTCTG CTGACATCTC GGTTTATGCA CGCCAGGGCT TCGGCACGCC GCTGCCGCTC
AAGGCCCCGT TCGGCCTGCT CATCATCGAC TTCGTCAACG GCTTTGCCGA CCCGGCCGTC
TTCGGCGGCG GCAACATCCC CGAAGCCATC GCGCAGACGC AGCACCTGCT GGCCCATGCG
CGCGAGCGTG GCTGGCCCGT GGCGCACAGC CGCATCGTGT TCTCGGACGA CGATGCCGAC
CACAACATCT TCTGCCTGAA GGTGCCCGGC ATGCTGACCC TGAAGGAAGA CAGCCCCAAC
AGCGCCATCG TGCCCCAGCT GGCCCCGGCC GCCGGCGAAT ACGTGGTGCG CAAGAGCACG
CCCTCGGCCT TCTTCGGCAC CATGCTCGCG CCCTGGCTGG CCCAGCGCGG CGTGCAGACC
CTGCTGGTGG CCGGCTGCGT GACCAGCGGC TGCGTGCGCG CCAGCGTGGT CGATGCCATG
CAGTCGGGCT TTCGCCCGCT GGTGGTGGCC GACTGCTGCG GCGACCGCGC CCTGGGCCCG
CACGAGGCCA ACCTGTTCGA CATGGCCCAG AAGTACGCGG CCGTGATGCC GCTGAGCCAG
GCCATCGCCG ACACCGACGC CCTCGCCGCA GGTTGA
 
Protein sequence
MTTATATTST QSVPTEGVQG DISADISVYA RQGFGTPLPL KAPFGLLIID FVNGFADPAV 
FGGGNIPEAI AQTQHLLAHA RERGWPVAHS RIVFSDDDAD HNIFCLKVPG MLTLKEDSPN
SAIVPQLAPA AGEYVVRKST PSAFFGTMLA PWLAQRGVQT LLVAGCVTSG CVRASVVDAM
QSGFRPLVVA DCCGDRALGP HEANLFDMAQ KYAAVMPLSQ AIADTDALAA G