| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1825 |
|---|
| Symbol | |
|---|
| ID | 5747383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2021347 |
|---|
| End bp | 2022156 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641296905 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_001562852 |
|---|
| Protein GI | 160897270 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATCCC GCTATGCTGT ACTTCCCGCG ACGGACGACA GGGCCCGTAC AGGCCCTGCG
GATGCGCTTC AACGGTGTTG CACCATGTCC GGTTCCTTAC AGACATCTCC GCTTCTTCCC
GCCGTGGCCT GGCAGGGCCT GCGCCAGGTC CATGTGCTGC AAAGCCTGAC CGACGAGCGA
CTGGCCGAAC TGGCGGCGCA GTGCCGCTGG CAGCATCTGG CGCTGCACCA GACGCTGGAG
GGCGCGTACA CCGATCAGCG TCTCTACATG CTCGTGCAGG GCGGCTTGCG CGTCAGCAGC
TATGCCCCCA ACGGGCGCGG GCTCACGCTG GGCGAGATTG CCCAGGGCGT GTTCTTCGGC
GGCCTGCCGC AGCAGCAGGT GGGCTGCACG GCCATGCCCC TGGTGGTCGA GGCAGGCGTC
CCCAGCCTGA TTGCCTCGCT GGCCCATGAG GATGTGGAAG CCCTGCTCAT GAACGAGCCC
CAGGTCCTGC GCGCCTTCAT CGGCCGGCTC AGCGACCTGG CCGTGGCGCT GGCGCGCCGC
ATGGTGGATC TGGGAACGCT GTCGGTGCGC AGCCGCCTGC ATACCCAGTT GCTGGAACGT
GCCGAGCGCG CGGGCATCGA CCAGGGGCAG GCCCTGCTGG CGCCCGCACC CCGGCAGACC
GACCTGGCCC TGATGCTGGG CTCCAGCCGC GAGGAAGTGG CGCGCGAGAT GTCGCGCCTA
GTGCGCCTGG GCCTGCTGCG GCGCGAAGGC CGCAACCTGC GCATCTGCCA TGTCGAAGGC
CTGCGCGTGC TGCTCGAGGA AGCGCGCTGA
|
|---|
| Protein sequence | MRSRYAVLPA TDDRARTGPA DALQRCCTMS GSLQTSPLLP AVAWQGLRQV HVLQSLTDER
LAELAAQCRW QHLALHQTLE GAYTDQRLYM LVQGGLRVSS YAPNGRGLTL GEIAQGVFFG
GLPQQQVGCT AMPLVVEAGV PSLIASLAHE DVEALLMNEP QVLRAFIGRL SDLAVALARR
MVDLGTLSVR SRLHTQLLER AERAGIDQGQ ALLAPAPRQT DLALMLGSSR EEVAREMSRL
VRLGLLRREG RNLRICHVEG LRVLLEEAR
|
|---|
| |